Detailed information    

insolico Bioinformatically predicted

Overview

Name   comM   Type   Regulator
Locus tag   ACLV7Z_RS01655 Genome accession   NZ_OZ217343
Coordinates   314101..314721 (+) Length   206 a.a.
NCBI ID   WP_049532500.1    Uniprot ID   -
Organism   Streptococcus mitis isolate S. mitis G22     
Function   fratricide immunity (predicted from homology)   
Competence regulation

Genomic Context

Location: 309101..319721
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLV7Z_RS01635 - 310938..311063 (+) 126 WP_411882149.1 hypothetical protein -
  ACLV7Z_RS01640 (SMIG22_03190) ndk 311113..311526 (+) 414 WP_000438297.1 nucleoside-diphosphate kinase -
  ACLV7Z_RS01645 (SMIG22_03210) cbpJ 311774..312757 (-) 984 WP_175880626.1 choline-binding protein CbpJ -
  ACLV7Z_RS01650 (SMIG22_03220) - 312990..313853 (+) 864 WP_173307500.1 helix-turn-helix domain-containing protein -
  ACLV7Z_RS01655 (SMIG22_03230) comM 314101..314721 (+) 621 WP_049532500.1 hypothetical protein Regulator
  ACLV7Z_RS01660 (SMIG22_03240) tsaE 314920..315363 (+) 444 WP_000288239.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  ACLV7Z_RS01665 (SMIG22_03250) - 315353..315871 (+) 519 WP_175880456.1 GNAT family N-acetyltransferase -
  ACLV7Z_RS01670 (SMIG22_03260) brpA 315879..316895 (+) 1017 WP_000239274.1 biofilm formation/cell division transcriptional regulator BrpA -
  ACLV7Z_RS01675 (SMIG22_03270) cinA 316979..318235 (+) 1257 WP_218774541.1 competence/damage-inducible protein A Machinery gene
  ACLV7Z_RS01680 (SMIG22_03280) recA 318290..319456 (+) 1167 WP_023933324.1 recombinase RecA Machinery gene

Sequence

Protein


Download         Length: 206 a.a.        Molecular weight: 23504.63 Da        Isoelectric Point: 10.0254

>NTDB_id=1170181 ACLV7Z_RS01655 WP_049532500.1 314101..314721(+) (comM) [Streptococcus mitis isolate S. mitis G22]
MKSMRILFLLALIQISLSSCFLWKECILSFKQSTAFFIGSMVFVSGICAGVNYLYTRKQEVHSVLASKQSVKLFYSILLL
INLLGAVLVLSDNLFIKNTLQQELVDFLLPSFFFLFGLDLLIFLPLKKYMRDLLAMLDRKKTVLVTILATLLFLRNPMTI
VSLLIYIGLGLFFAAYLVPNSVKKEVSFYGHIFRDLVLVIATLIFF

Nucleotide


Download         Length: 621 bp        

>NTDB_id=1170181 ACLV7Z_RS01655 WP_049532500.1 314101..314721(+) (comM) [Streptococcus mitis isolate S. mitis G22]
ATGAAATCAATGAGAATCTTATTTTTATTAGCTTTAATTCAAATCAGTTTGAGTAGCTGTTTCCTATGGAAAGAATGCAT
CTTGTCCTTTAAACAAAGTACAGCTTTTTTCATCGGAAGTATGGTCTTCGTTTCAGGAATCTGTGCTGGAGTAAATTATC
TTTATACCCGTAAGCAAGAAGTCCATAGTGTCCTAGCCAGTAAGCAGTCAGTGAAGCTTTTTTACAGTATCCTGCTCTTA
ATTAATTTGTTAGGAGCTGTTCTTGTCCTGTCAGATAACTTGTTCATCAAAAATACGCTGCAGCAAGAATTAGTTGACTT
TTTATTGCCATCCTTTTTCTTTCTATTTGGGCTAGATTTGCTGATTTTTTTACCCTTAAAAAAATACATGCGTGATTTGC
TTGCTATGCTAGATAGAAAAAAGACAGTGTTGGTGACTATTTTAGCAACACTTCTCTTCTTAAGAAATCCAATGACCATT
GTCTCTCTTTTGATTTATATTGGACTGGGTTTGTTTTTTGCAGCCTATCTTGTCCCAAATTCGGTTAAGAAGGAAGTTTC
CTTTTATGGTCATATTTTCCGAGATCTTGTATTGGTCATTGCTACGCTCATTTTCTTTTAG

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comM Streptococcus pneumoniae D39

97.573

100

0.976
  comM Streptococcus pneumoniae R6

97.573

100

0.976
  comM Streptococcus pneumoniae TIGR4

97.573

100

0.976
  comM Streptococcus mitis SK321

38.462

94.66

0.364

Multiple sequence alignment