Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   ACLV7Z_RS01585 Genome accession   NZ_OZ217343
Coordinates   297692..298729 (+) Length   345 a.a.
NCBI ID   WP_218774534.1    Uniprot ID   -
Organism   Streptococcus mitis isolate S. mitis G22     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 292692..303729
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLV7Z_RS01555 (SMIG22_03030) - 293629..293907 (-) 279 WP_001174613.1 acylphosphatase -
  ACLV7Z_RS01560 (SMIG22_03040) - 293941..294681 (+) 741 WP_218774530.1 TrmH family RNA methyltransferase -
  ACLV7Z_RS01565 (SMIG22_03050) - 294737..295420 (+) 684 WP_001016914.1 Bax inhibitor-1/YccA family protein -
  ACLV7Z_RS01570 (SMIG22_03060) asnA 295531..296523 (+) 993 WP_218774531.1 aspartate--ammonia ligase -
  ACLV7Z_RS01575 (SMIG22_03070) rsmD 296691..297230 (+) 540 WP_218774532.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  ACLV7Z_RS01580 (SMIG22_03080) coaD 297220..297708 (+) 489 WP_218774533.1 pantetheine-phosphate adenylyltransferase -
  ACLV7Z_RS01585 (SMIG22_03090) sepM 297692..298729 (+) 1038 WP_218774534.1 SepM family pheromone-processing serine protease Regulator
  ACLV7Z_RS01590 (SMIG22_03100) - 298787..299017 (+) 231 WP_078135418.1 DUF1146 family protein -
  ACLV7Z_RS01595 (SMIG22_03110) murA 299041..300324 (+) 1284 WP_218774535.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  ACLV7Z_RS01600 (SMIG22_03120) - 300317..300505 (+) 189 WP_218774536.1 DNA-directed RNA polymerase subunit beta -
  ACLV7Z_RS01605 (SMIG22_03130) endA 300544..301368 (+) 825 WP_218774537.1 DNA/RNA non-specific endonuclease Machinery gene
  ACLV7Z_RS01610 (SMIG22_03140) - 301518..302849 (+) 1332 WP_218774538.1 hemolysin family protein -
  ACLV7Z_RS01615 - 302911..303045 (+) 135 WP_259390846.1 hypothetical protein -

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 37432.40 Da        Isoelectric Point: 5.2054

>NTDB_id=1170179 ACLV7Z_RS01585 WP_218774534.1 297692..298729(+) (sepM) [Streptococcus mitis isolate S. mitis G22]
MKKKIRWPLYVIAALIVTFLAFVVPLPYYIEVPGGSEDIRQVLKVNDTEDQAAGAYHFVTVGVQHATLAHMVYAWLTPFT
DIRSAQETTGGSSDVEFMRINQFYMQTSQNMAKYQGLKTAGKDIELKYFGVYVLNVTDNSTFKGILNISDTVTAVNDQTF
DSSKDLIDYVSSQQLGDSVKVTYEEDGQTKSAEGKIITLENGKNGIGIGLIDRTEVISNVPISFSTAGIGGPSAGLMFSL
AIYTQIAHPGLRNGRIVAGTGTIDRDGNVGDIGGIDKKVVASARSGAAIFFAPDNPVSEEEQKAHPDAKNNYQTALEAAK
TIKTDMKIVPVKTLQDAIDYLKNNP

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=1170179 ACLV7Z_RS01585 WP_218774534.1 297692..298729(+) (sepM) [Streptococcus mitis isolate S. mitis G22]
ATGAAAAAAAAGATTAGATGGCCCTTATATGTCATTGCGGCCTTGATTGTGACCTTCTTGGCATTTGTGGTGCCTTTGCC
CTACTATATAGAGGTTCCAGGTGGTTCGGAAGATATTCGCCAAGTCCTTAAAGTAAATGACACAGAAGATCAGGCGGCTG
GTGCCTATCACTTTGTTACGGTTGGTGTCCAGCATGCCACATTGGCTCATATGGTTTATGCTTGGTTGACGCCTTTTACA
GATATTCGTAGTGCTCAAGAGACTACAGGTGGCTCTTCCGATGTAGAATTTATGCGGATCAATCAATTCTACATGCAAAC
ATCGCAAAATATGGCCAAGTATCAAGGTCTAAAAACAGCTGGTAAGGATATCGAACTCAAGTACTTTGGGGTTTATGTCT
TGAATGTGACGGATAATTCAACCTTTAAAGGGATTCTCAATATCTCTGATACGGTCACAGCAGTCAATGATCAGACATTT
GATAGTTCCAAAGACTTGATTGATTACGTCAGTTCTCAACAATTAGGGGACTCCGTTAAGGTCACCTATGAAGAGGATGG
GCAAACCAAATCTGCAGAAGGTAAGATTATCACCTTGGAAAATGGAAAAAATGGGATTGGAATCGGCTTGATTGATCGTA
CAGAGGTAATCAGCAATGTCCCAATTAGTTTTTCAACAGCTGGTATTGGCGGTCCAAGTGCTGGTCTCATGTTTAGTCTA
GCTATCTATACTCAAATAGCTCACCCAGGTCTTCGTAATGGTCGTATTGTTGCCGGTACAGGAACCATTGACCGTGATGG
CAATGTGGGGGATATTGGTGGTATTGACAAGAAAGTTGTAGCTTCTGCTAGGTCAGGTGCCGCTATTTTCTTTGCTCCTG
ATAACCCTGTTAGCGAAGAAGAACAAAAAGCGCATCCTGATGCTAAAAACAACTACCAAACAGCCCTAGAAGCGGCCAAA
ACAATCAAGACAGATATGAAAATCGTGCCTGTTAAAACCCTACAAGATGCAATTGATTACTTGAAAAACAATCCCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

58.48

99.13

0.58


Multiple sequence alignment