Detailed information
Bioinformatically predicted
Overview
| Name | clpX | Type | Regulator |
| Locus tag | ACLV65_RS03325 | Genome accession | NZ_OZ217342 |
| Coordinates | 637075..638307 (+) | Length | 410 a.a. |
| NCBI ID | WP_138031720.1 | Uniprot ID | - |
| Organism | Streptococcus mitis isolate S. mitis B22 | ||
| Function | require for competence development (predicted from homology) Competence regulation |
||
Genomic Context
Location: 632075..643307
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACLV65_RS03295 (SMIB22_06410) | - | 632419..633096 (+) | 678 | WP_411864514.1 | DnaD domain-containing protein | - |
| ACLV65_RS03300 (SMIB22_06420) | tpiA | 633194..633952 (+) | 759 | WP_000087891.1 | triose-phosphate isomerase | - |
| ACLV65_RS03305 (SMIB22_06430) | lytC | 633990..635480 (+) | 1491 | WP_411864515.1 | choline binding-anchored murein hydrolase LytC | - |
| ACLV65_RS03310 (SMIB22_06440) | - | 635719..636237 (+) | 519 | WP_000229854.1 | Dps family protein | - |
| ACLV65_RS03315 (SMIB22_06450) | - | 636367..636873 (+) | 507 | WP_000162459.1 | dihydrofolate reductase | - |
| ACLV65_RS03320 (SMIB22_06460) | - | 636873..637043 (+) | 171 | WP_000442276.1 | hypothetical protein | - |
| ACLV65_RS03325 (SMIB22_06470) | clpX | 637075..638307 (+) | 1233 | WP_138031720.1 | ATP-dependent Clp protease ATP-binding subunit ClpX | Regulator |
| ACLV65_RS03330 (SMIB22_06480) | yihA | 638316..638903 (+) | 588 | WP_000422605.1 | ribosome biogenesis GTP-binding protein YihA/YsxC | - |
| ACLV65_RS03335 (SMIB22_06490) | - | 638914..639294 (+) | 381 | WP_001140420.1 | RidA family protein | - |
| ACLV65_RS03340 (SMIB22_06500) | rapZ | 639346..640236 (+) | 891 | WP_411864516.1 | RNase adapter RapZ | - |
| ACLV65_RS03345 (SMIB22_06510) | - | 640233..641210 (+) | 978 | WP_411864517.1 | YvcK family protein | - |
| ACLV65_RS03350 (SMIB22_06520) | whiA | 641207..642118 (+) | 912 | WP_033684109.1 | DNA-binding protein WhiA | - |
Sequence
Protein
Download Length: 410 a.a. Molecular weight: 45737.31 Da Isoelectric Point: 4.4550
>NTDB_id=1170115 ACLV65_RS03325 WP_138031720.1 637075..638307(+) (clpX) [Streptococcus mitis isolate S. mitis B22]
MPTTRKNDMMVYCSFCGKNQEEVQKIIAGNNAFICNECVELAQEIIREELVEEVLADLSEVPKPIELLHILNHYVIGQDR
AKRALAVAVYNHYKRINFHDTREESEDVDLQKSNILMIGPTGSGKTFLAQTLAKSLNVPFAIADATALTEAGYVGEDVEN
ILLKLLQAADFNIERAERGIIYVDEIDKIAKKSENVSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPQQEMIQVDT
KNILFIVGGAFDGIEEIVKQRLGEKVIGFGQNNKAIDENSSYMQEIIAEDIQKFGIIPELIGRLPVFAALEQLTVDDLVR
ILKEPRNALVKQYQTLLSYDDVELEFDDEALQEIANKAIERKTGARGLRSIIEETMLDVMFEVPSQENVKLVRITKEAVD
GTDKPILETA
MPTTRKNDMMVYCSFCGKNQEEVQKIIAGNNAFICNECVELAQEIIREELVEEVLADLSEVPKPIELLHILNHYVIGQDR
AKRALAVAVYNHYKRINFHDTREESEDVDLQKSNILMIGPTGSGKTFLAQTLAKSLNVPFAIADATALTEAGYVGEDVEN
ILLKLLQAADFNIERAERGIIYVDEIDKIAKKSENVSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPQQEMIQVDT
KNILFIVGGAFDGIEEIVKQRLGEKVIGFGQNNKAIDENSSYMQEIIAEDIQKFGIIPELIGRLPVFAALEQLTVDDLVR
ILKEPRNALVKQYQTLLSYDDVELEFDDEALQEIANKAIERKTGARGLRSIIEETMLDVMFEVPSQENVKLVRITKEAVD
GTDKPILETA
Nucleotide
Download Length: 1233 bp
>NTDB_id=1170115 ACLV65_RS03325 WP_138031720.1 637075..638307(+) (clpX) [Streptococcus mitis isolate S. mitis B22]
ATGCCTACAACTAGAAAAAATGATATGATGGTTTATTGCTCATTTTGTGGCAAAAACCAAGAAGAAGTACAAAAAATAAT
CGCTGGCAACAATGCTTTTATTTGTAATGAATGCGTGGAGTTAGCTCAGGAAATCATTCGAGAAGAATTGGTTGAGGAAG
TCTTGGCAGACTTGTCTGAAGTTCCAAAACCAATTGAACTCCTCCATATCTTGAACCACTATGTTATCGGTCAAGATCGT
GCCAAGCGTGCCTTGGCAGTGGCGGTTTATAATCACTACAAACGCATCAATTTCCACGATACGCGTGAAGAGTCAGAAGA
TGTGGATTTGCAGAAGTCAAATATCTTGATGATTGGTCCAACTGGTTCAGGGAAAACATTCCTTGCCCAGACCTTGGCTA
AGAGCTTGAATGTGCCTTTTGCGATTGCGGATGCGACAGCTCTGACGGAGGCTGGTTATGTGGGTGAGGACGTGGAAAAT
ATCCTCCTTAAACTCTTGCAGGCTGCTGACTTTAACATTGAGCGCGCAGAGCGTGGGATTATCTATGTGGATGAAATTGA
CAAGATTGCCAAGAAGAGCGAGAACGTGTCTATCACACGGGATGTTTCTGGTGAAGGGGTGCAACAAGCCCTTCTCAAGA
TTATCGAAGGAACAGTTGCTAGCGTACCACCTCAAGGTGGACGCAAACATCCGCAACAAGAGATGATTCAAGTAGATACC
AAGAATATCCTCTTCATTGTTGGTGGTGCCTTTGATGGTATTGAAGAAATTGTTAAACAACGTCTTGGAGAAAAAGTCAT
CGGATTTGGTCAAAATAACAAGGCGATTGATGAAAATAGCTCTTACATGCAAGAAATCATCGCAGAAGATATTCAAAAGT
TTGGTATTATCCCTGAGTTGATTGGACGTTTGCCTGTCTTTGCAGCTCTTGAGCAATTGACGGTTGATGACTTGGTTCGT
ATCTTGAAAGAGCCAAGAAATGCCTTGGTCAAACAATACCAAACCTTGCTATCTTATGATGATGTTGAGTTGGAATTTGA
CGATGAAGCCCTTCAAGAGATTGCAAATAAAGCCATCGAACGTAAAACGGGTGCGCGTGGTCTTCGCTCCATTATCGAAG
AAACCATGCTAGACGTCATGTTTGAAGTACCGAGTCAGGAAAATGTGAAATTGGTCCGCATCACAAAAGAAGCTGTCGAT
GGAACGGATAAACCAATCCTAGAAACAGCCTAG
ATGCCTACAACTAGAAAAAATGATATGATGGTTTATTGCTCATTTTGTGGCAAAAACCAAGAAGAAGTACAAAAAATAAT
CGCTGGCAACAATGCTTTTATTTGTAATGAATGCGTGGAGTTAGCTCAGGAAATCATTCGAGAAGAATTGGTTGAGGAAG
TCTTGGCAGACTTGTCTGAAGTTCCAAAACCAATTGAACTCCTCCATATCTTGAACCACTATGTTATCGGTCAAGATCGT
GCCAAGCGTGCCTTGGCAGTGGCGGTTTATAATCACTACAAACGCATCAATTTCCACGATACGCGTGAAGAGTCAGAAGA
TGTGGATTTGCAGAAGTCAAATATCTTGATGATTGGTCCAACTGGTTCAGGGAAAACATTCCTTGCCCAGACCTTGGCTA
AGAGCTTGAATGTGCCTTTTGCGATTGCGGATGCGACAGCTCTGACGGAGGCTGGTTATGTGGGTGAGGACGTGGAAAAT
ATCCTCCTTAAACTCTTGCAGGCTGCTGACTTTAACATTGAGCGCGCAGAGCGTGGGATTATCTATGTGGATGAAATTGA
CAAGATTGCCAAGAAGAGCGAGAACGTGTCTATCACACGGGATGTTTCTGGTGAAGGGGTGCAACAAGCCCTTCTCAAGA
TTATCGAAGGAACAGTTGCTAGCGTACCACCTCAAGGTGGACGCAAACATCCGCAACAAGAGATGATTCAAGTAGATACC
AAGAATATCCTCTTCATTGTTGGTGGTGCCTTTGATGGTATTGAAGAAATTGTTAAACAACGTCTTGGAGAAAAAGTCAT
CGGATTTGGTCAAAATAACAAGGCGATTGATGAAAATAGCTCTTACATGCAAGAAATCATCGCAGAAGATATTCAAAAGT
TTGGTATTATCCCTGAGTTGATTGGACGTTTGCCTGTCTTTGCAGCTCTTGAGCAATTGACGGTTGATGACTTGGTTCGT
ATCTTGAAAGAGCCAAGAAATGCCTTGGTCAAACAATACCAAACCTTGCTATCTTATGATGATGTTGAGTTGGAATTTGA
CGATGAAGCCCTTCAAGAGATTGCAAATAAAGCCATCGAACGTAAAACGGGTGCGCGTGGTCTTCGCTCCATTATCGAAG
AAACCATGCTAGACGTCATGTTTGAAGTACCGAGTCAGGAAAATGTGAAATTGGTCCGCATCACAAAAGAAGCTGTCGAT
GGAACGGATAAACCAATCCTAGAAACAGCCTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpX | Streptococcus mutans UA159 |
86.829 |
100 |
0.868 |
| clpX | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
57.463 |
98.049 |
0.563 |