Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   ACLV7Q_RS01615 Genome accession   NZ_OZ217341
Coordinates   317841..319601 (+) Length   586 a.a.
NCBI ID   WP_218758060.1    Uniprot ID   -
Organism   Streptococcus mitis isolate S. mitis C22     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 312841..324601
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLV7Q_RS01600 (SMIC22_03060) - 314744..315460 (+) 717 WP_057488302.1 YebC/PmpR family DNA-binding transcriptional regulator -
  ACLV7Q_RS01605 (SMIC22_03070) - 315637..316107 (+) 471 WP_218758062.1 MarR family winged helix-turn-helix transcriptional regulator -
  ACLV7Q_RS01610 (SMIC22_03080) rcrP 316082..317851 (+) 1770 WP_218758061.1 ABC transporter ATP-binding protein Regulator
  ACLV7Q_RS01615 (SMIC22_03090) rcrQ 317841..319601 (+) 1761 WP_218758060.1 ABC transporter ATP-binding protein Regulator
  ACLV7Q_RS01620 - 319637..319858 (-) 222 WP_218758059.1 hypothetical protein -
  ACLV7Q_RS01625 (SMIC22_03100) - 319894..320397 (+) 504 WP_218758058.1 phosphatase PAP2 family protein -
  ACLV7Q_RS01630 (SMIC22_03110) - 320617..321063 (+) 447 WP_218758057.1 LytTR family DNA-binding domain-containing protein -
  ACLV7Q_RS01635 (SMIC22_03120) - 321068..321742 (+) 675 WP_218758056.1 hypothetical protein -
  ACLV7Q_RS01640 - 321985..322182 (+) 198 Protein_289 N-acetylmuramoyl-L-alanine amidase family protein -
  ACLV7Q_RS01645 - 322207..322338 (-) 132 WP_033679736.1 hypothetical protein -
  ACLV7Q_RS01650 (SMIC22_03130) - 322432..322731 (+) 300 WP_172934433.1 DUF4651 domain-containing protein -
  ACLV7Q_RS01655 (SMIC22_03140) - 322728..323045 (+) 318 WP_000615777.1 thioredoxin family protein -
  ACLV7Q_RS01660 (SMIC22_03150) ytpR 323061..323687 (+) 627 WP_173307400.1 YtpR family tRNA-binding protein -
  ACLV7Q_RS01665 (SMIC22_03160) - 323729..324490 (+) 762 WP_173307401.1 SDR family NAD(P)-dependent oxidoreductase -

Sequence

Protein


Download         Length: 586 a.a.        Molecular weight: 64553.25 Da        Isoelectric Point: 4.9083

>NTDB_id=1170021 ACLV7Q_RS01615 WP_218758060.1 317841..319601(+) (rcrQ) [Streptococcus mitis isolate S. mitis C22]
MENKKMSLWKQSKPYLAGLQFALLIAFLATIVSNIITVYGPTRIKEMTNIIASGLETSVDVAAVAAIGGFLAAIYVIGLL
SNYLQAFLFTTAIQRFSERLRRAIAEKINSLPLGYFDGHSQGDTLSRVTNDVDTAAQSLNQSLGTVLSSSLLVLAVLVTM
FGMNWILALVTVVSTLVGFAFVSVFMGKSQGFFKSQQQDLAAVNGYVEEMYSGHNVVTSYNAIESTKEEFAKLNHRLYDS
IWKSQFISGIMMPIMMFIGNFSYALVIIVGAALALNGHISIGIIVAFMAYVRIFSQPLSQIAQGITSLQQASAAMGRVFE
FLAEEEMEDESHKARQLSDMKGQVVFDRVSFGYTPERTIIHDFSATAHAGQKVAIVGPTGAGKTTIVNLLMKFYEIDKGS
IRIDGVNTKEMKRSEVHDAFSMVLQDTWLFEGTIRDNLIYNQEGISDERVIEASKAVGIHHFIMTLPDGYDTVLDDTVPL
SVGQKQLLTIARALLKDAPLLILDEATSSVDTRTEELIQKAMDCLMEGRTSFVIAHRLSTIRNADLILVMKDGNIIEQGN
HDELMAQAGFYADLYNSQFTEDEAEE

Nucleotide


Download         Length: 1761 bp        

>NTDB_id=1170021 ACLV7Q_RS01615 WP_218758060.1 317841..319601(+) (rcrQ) [Streptococcus mitis isolate S. mitis C22]
ATGGAAAATAAGAAAATGTCTCTCTGGAAACAGAGTAAACCCTATCTTGCGGGCCTCCAGTTTGCCCTTCTGATTGCCTT
TCTAGCAACAATCGTATCCAATATCATTACTGTATATGGTCCAACCCGCATCAAGGAAATGACTAATATTATTGCCAGTG
GTCTGGAAACAAGTGTGGATGTCGCGGCAGTTGCAGCTATTGGTGGTTTTTTGGCCGCGATTTATGTGATTGGACTCCTA
TCAAATTATTTGCAGGCCTTTCTGTTTACAACAGCTATTCAACGATTTTCAGAGCGTTTGAGAAGAGCGATTGCAGAGAA
AATCAATAGCCTACCATTGGGATATTTTGATGGACACTCTCAGGGGGATACTTTGTCTCGTGTAACCAATGATGTTGATA
CTGCAGCCCAGTCCCTTAATCAAAGTCTGGGAACAGTTCTTTCATCTAGTTTATTGGTCTTGGCAGTCTTGGTAACCATG
TTTGGGATGAACTGGATTTTAGCCTTGGTGACGGTTGTTTCAACTCTTGTTGGCTTTGCTTTCGTGTCTGTCTTTATGGG
CAAATCCCAGGGCTTCTTTAAGAGTCAGCAACAGGATTTGGCAGCTGTCAATGGTTATGTGGAGGAAATGTACTCTGGCC
ATAATGTGGTGACCAGTTACAATGCTATCGAGAGCACGAAAGAAGAGTTTGCGAAATTAAACCATCGTCTGTATGATAGT
ATCTGGAAATCTCAGTTTATTTCAGGGATTATGATGCCGATTATGATGTTTATTGGGAACTTCAGCTATGCCTTGGTGAT
TATCGTTGGTGCAGCCTTGGCCTTAAATGGGCACATCAGTATCGGGATTATAGTTGCCTTTATGGCCTACGTTCGTATCT
TTTCTCAGCCCCTTTCACAAATTGCCCAAGGGATTACTAGTCTTCAGCAGGCTAGTGCGGCCATGGGACGTGTCTTCGAA
TTCCTAGCTGAAGAGGAAATGGAAGACGAATCCCATAAAGCAAGACAATTGAGCGATATGAAAGGTCAAGTGGTCTTTGA
TCGAGTTTCCTTTGGTTACACACCAGAGCGAACTATTATCCATGACTTTTCTGCGACAGCTCATGCAGGTCAAAAGGTTG
CCATTGTCGGACCGACCGGAGCTGGGAAGACAACCATTGTCAATCTTTTGATGAAGTTTTATGAGATTGATAAGGGAAGT
ATCCGCATCGATGGCGTGAATACCAAGGAGATGAAGCGTTCGGAAGTACATGATGCCTTTTCAATGGTCTTGCAAGACAC
CTGGCTCTTTGAAGGGACCATTCGCGACAATCTCATCTATAACCAAGAGGGTATTAGTGATGAGCGCGTGATCGAAGCCA
GCAAGGCTGTAGGGATTCACCACTTTATTATGACCTTACCAGATGGTTACGATACCGTCTTGGATGATACAGTGCCCTTG
TCTGTCGGACAAAAACAACTCTTGACCATTGCTCGTGCTTTGCTGAAAGATGCGCCACTCCTAATCCTAGATGAAGCGAC
TTCTTCTGTTGATACCCGTACAGAGGAATTGATTCAGAAAGCTATGGATTGTTTGATGGAGGGCAGAACTTCCTTTGTCA
TCGCCCACCGCTTGTCTACTATCCGAAATGCTGATCTTATCCTCGTCATGAAAGATGGCAATATCATCGAGCAAGGCAAT
CATGATGAGCTAATGGCGCAAGCTGGTTTCTACGCTGACCTCTACAACAGTCAATTTACAGAAGACGAAGCAGAAGAATA
A

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(23-298)

ABC transporter (ABC_tran)

(361-508)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

66.781

99.659

0.666

Multiple sequence alignment