Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   ACLV7Q_RS01610 Genome accession   NZ_OZ217341
Coordinates   316082..317851 (+) Length   589 a.a.
NCBI ID   WP_218758061.1    Uniprot ID   -
Organism   Streptococcus mitis isolate S. mitis C22     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 311082..322851
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLV7Q_RS01580 (SMIC22_03020) - 311255..311713 (+) 459 WP_173261663.1 DUF4231 domain-containing protein -
  ACLV7Q_RS01585 (SMIC22_03030) - 311726..312334 (+) 609 WP_218758074.1 hypothetical protein -
  ACLV7Q_RS01590 (SMIC22_03040) - 312327..312737 (+) 411 WP_000595751.1 hypothetical protein -
  ACLV7Q_RS01595 (SMIC22_03050) ply 312748..314163 (+) 1416 WP_061438673.1 cholesterol-dependent cytolysin pneumolysin -
  ACLV7Q_RS01600 (SMIC22_03060) - 314744..315460 (+) 717 WP_057488302.1 YebC/PmpR family DNA-binding transcriptional regulator -
  ACLV7Q_RS01605 (SMIC22_03070) - 315637..316107 (+) 471 WP_218758062.1 MarR family winged helix-turn-helix transcriptional regulator -
  ACLV7Q_RS01610 (SMIC22_03080) rcrP 316082..317851 (+) 1770 WP_218758061.1 ABC transporter ATP-binding protein Regulator
  ACLV7Q_RS01615 (SMIC22_03090) rcrQ 317841..319601 (+) 1761 WP_218758060.1 ABC transporter ATP-binding protein Regulator
  ACLV7Q_RS01620 - 319637..319858 (-) 222 WP_218758059.1 hypothetical protein -
  ACLV7Q_RS01625 (SMIC22_03100) - 319894..320397 (+) 504 WP_218758058.1 phosphatase PAP2 family protein -
  ACLV7Q_RS01630 (SMIC22_03110) - 320617..321063 (+) 447 WP_218758057.1 LytTR family DNA-binding domain-containing protein -
  ACLV7Q_RS01635 (SMIC22_03120) - 321068..321742 (+) 675 WP_218758056.1 hypothetical protein -
  ACLV7Q_RS01640 - 321985..322182 (+) 198 Protein_289 N-acetylmuramoyl-L-alanine amidase family protein -
  ACLV7Q_RS01645 - 322207..322338 (-) 132 WP_033679736.1 hypothetical protein -
  ACLV7Q_RS01650 (SMIC22_03130) - 322432..322731 (+) 300 WP_172934433.1 DUF4651 domain-containing protein -

Sequence

Protein


Download         Length: 589 a.a.        Molecular weight: 65518.02 Da        Isoelectric Point: 5.8410

>NTDB_id=1170020 ACLV7Q_RS01610 WP_218758061.1 316082..317851(+) (rcrP) [Streptococcus mitis isolate S. mitis C22]
MKKLAKRISRKEWEMILLAILFTCFSVYLELEVPTYISKITDLLGSQGTNLDELWQPASMMVGMSFLAFLSVVAVGFFAS
RVAASYTSRLRSDIFNRVLDYSQTEIKKFSIPSLLTRTTNDITQVQMLITMGLQVVTRGPIMAIWAIGKILGHSEYWLWA
VLVAVIVNVLMTTVLMTLAFPKQSLIQGLTDKLNSITRESLTGIRVVRAYNAEEYQNEKFASVNDELTRLNLFVNRLMAI
LNPIMMGISSGLSVAIYWIGAYVINDAAPIARLPLFSDMIVFMSYAMQVVMGFLLMGALFIVLPRTMVSAKRINQVLDLH
SSIQNPAQVQLADENLKGQVEFKDVTFRYAANSEAVIEHVSFKAEAGQTVAFIGSTGSGKSTLVNLIPRFYDVSEGEILV
DGVNVQDYALEDLRNKVGYIPQKAVLFSGDVKGNLDFGQSQETPLSEQAMWQALELAQSKNFIEDKEAGLASEVAQGGTN
FSGGQRQRLAIARALARKPEILIFDDSFSALDYKTDRVLRQELAEKTKSMTKLIVAQRISTIMDADLILVLDQGKVVGQG
THKELLANNEVYQEIAYSQLSKEELEHGK

Nucleotide


Download         Length: 1770 bp        

>NTDB_id=1170020 ACLV7Q_RS01610 WP_218758061.1 316082..317851(+) (rcrP) [Streptococcus mitis isolate S. mitis C22]
ATGAAGAAATTAGCCAAAAGAATTAGTAGAAAAGAATGGGAGATGATTTTACTTGCCATTCTCTTTACTTGCTTTTCGGT
CTATCTGGAGTTGGAAGTGCCGACCTATATCTCGAAAATTACGGATTTGCTAGGTAGTCAAGGAACTAATTTAGATGAGT
TGTGGCAGCCGGCGAGCATGATGGTGGGAATGTCCTTTCTTGCCTTCTTGTCCGTAGTTGCAGTTGGATTTTTTGCATCC
CGAGTGGCGGCTTCTTATACTAGTAGGCTGAGAAGTGATATTTTTAACCGAGTTTTAGACTACTCGCAGACAGAGATTAA
GAAATTCTCTATTCCCAGTCTTTTAACTCGTACTACCAATGACATTACTCAAGTTCAAATGTTGATTACCATGGGTTTGC
AAGTGGTTACGCGTGGTCCAATTATGGCTATCTGGGCTATCGGGAAGATTTTAGGTCATTCAGAATACTGGCTCTGGGCC
GTACTTGTGGCAGTGATTGTCAATGTTTTGATGACGACCGTTTTGATGACGCTAGCCTTTCCAAAACAGTCCTTGATTCA
GGGGCTGACAGACAAACTGAACAGTATCACTCGTGAGAGTTTAACAGGTATTCGTGTCGTTCGCGCCTACAATGCTGAAG
AATACCAAAATGAAAAATTTGCATCAGTAAATGATGAATTGACACGCTTGAATTTGTTTGTCAACCGTCTTATGGCTATT
TTGAACCCTATCATGATGGGGATTTCAAGTGGTTTGAGTGTGGCGATTTACTGGATTGGGGCCTATGTGATTAACGACGC
TGCTCCAATAGCGCGTCTGCCTCTCTTTAGTGACATGATTGTTTTCATGTCTTATGCTATGCAGGTTGTCATGGGCTTCC
TTCTCATGGGAGCACTCTTCATCGTTCTTCCCCGAACTATGGTCTCTGCCAAGCGGATCAACCAGGTTTTAGATTTACAT
TCTTCTATCCAAAACCCTGCTCAAGTGCAGCTGGCTGATGAAAACCTCAAAGGTCAGGTCGAGTTTAAGGATGTGACCTT
CCGCTATGCGGCAAATTCGGAGGCGGTTATTGAGCATGTTAGCTTTAAAGCAGAAGCTGGTCAAACAGTGGCCTTTATTG
GGTCAACAGGTTCTGGTAAATCAACTCTGGTCAATCTGATTCCACGATTCTACGACGTGTCAGAAGGAGAAATTCTGGTG
GACGGTGTCAATGTTCAAGACTATGCCTTAGAAGATTTGCGCAACAAGGTTGGTTATATTCCTCAGAAAGCGGTTCTCTT
TTCAGGTGATGTTAAGGGCAATTTGGACTTTGGACAGAGTCAAGAAACACCACTTAGTGAACAAGCTATGTGGCAAGCCT
TAGAATTGGCCCAGTCTAAGAACTTTATCGAAGATAAGGAAGCGGGCTTAGCGTCAGAAGTGGCCCAAGGAGGAACCAAC
TTCTCAGGTGGTCAAAGACAGCGTCTAGCAATTGCGCGTGCCTTAGCTCGGAAGCCAGAAATCCTCATCTTTGATGACTC
CTTCTCAGCCTTGGACTACAAGACAGACCGTGTCCTACGCCAAGAGTTAGCAGAGAAAACTAAGTCTATGACCAAGCTTA
TCGTCGCACAGCGTATTTCAACGATTATGGACGCAGATTTGATTTTGGTCTTGGATCAAGGAAAAGTCGTGGGGCAAGGC
ACCCACAAGGAACTTCTAGCTAATAATGAAGTTTACCAAGAAATTGCCTATTCACAACTATCGAAGGAGGAATTGGAACA
TGGAAAATAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(17-292)

ABC transporter (ABC_tran)

(358-507)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

66.389

100

0.677

Multiple sequence alignment