Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   ACLV7Q_RS01445 Genome accession   NZ_OZ217341
Coordinates   269207..270244 (+) Length   345 a.a.
NCBI ID   WP_218757217.1    Uniprot ID   -
Organism   Streptococcus mitis isolate S. mitis C22     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 264207..275244
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLV7Q_RS01410 (SMIC22_02670) yidC 264245..265171 (-) 927 WP_054388445.1 membrane protein insertase YidC -
  ACLV7Q_RS01415 (SMIC22_02680) - 265249..265527 (-) 279 WP_001174613.1 acylphosphatase -
  ACLV7Q_RS01420 (SMIC22_02690) - 265561..266301 (+) 741 WP_218757220.1 TrmH family RNA methyltransferase -
  ACLV7Q_RS01425 (SMIC22_02700) - 266356..267039 (+) 684 WP_001016914.1 Bax inhibitor-1/YccA family protein -
  ACLV7Q_RS01430 (SMIC22_02710) asnA 267149..268141 (+) 993 WP_000748003.1 aspartate--ammonia ligase -
  ACLV7Q_RS01435 (SMIC22_02720) rsmD 268206..268745 (+) 540 WP_218757219.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  ACLV7Q_RS01440 (SMIC22_02730) coaD 268735..269223 (+) 489 WP_218757218.1 pantetheine-phosphate adenylyltransferase -
  ACLV7Q_RS01445 (SMIC22_02740) sepM 269207..270244 (+) 1038 WP_218757217.1 SepM family pheromone-processing serine protease Regulator
  ACLV7Q_RS01450 (SMIC22_02750) - 270302..270532 (+) 231 WP_000250395.1 DUF1146 family protein -
  ACLV7Q_RS01455 (SMIC22_02760) murA 270556..271839 (+) 1284 WP_218757216.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  ACLV7Q_RS01460 (SMIC22_02770) - 271826..272020 (+) 195 WP_050236587.1 DNA-directed RNA polymerase subunit beta -
  ACLV7Q_RS01465 (SMIC22_02780) endA 272059..272883 (+) 825 WP_218757215.1 DNA/RNA non-specific endonuclease Machinery gene
  ACLV7Q_RS01470 (SMIC22_02790) - 273038..274369 (+) 1332 WP_218757214.1 hemolysin family protein -

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 37566.57 Da        Isoelectric Point: 4.9590

>NTDB_id=1170014 ACLV7Q_RS01445 WP_218757217.1 269207..270244(+) (sepM) [Streptococcus mitis isolate S. mitis C22]
MKKKIRWPLYVIAALIVTFLAFVVPLPYYIEVPGGSEDIRQVLKVNDTEDKEAGAYHFVTVGVQHATLAHMVYAWLTPFT
DIRSVQETTGGTSDVEFMRINQFYMQTSQNMAKYQGLKTAGKDIELKYFGVYVLNVTDNSTFKGILNISDTVTAVNDQTF
DSSKDLIDYVSSQKLGDSVKVTYEEDGQTKSAEGKIISLENGKNGIGIGLIDRTEVISNVPISFSTAGIGGPSAGLMFSL
AIYTQIADPGLRNGRIVAGTGTIDRDGNVGDIGGIDKKVVASAREGAAIFFAPDNPVSEEEQKAHPDAKNNYQTALEAAR
TIKTDMKIVPVKTLQDAIDYLKNNP

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=1170014 ACLV7Q_RS01445 WP_218757217.1 269207..270244(+) (sepM) [Streptococcus mitis isolate S. mitis C22]
ATGAAAAAAAAGATTAGATGGCCCTTATATGTCATTGCGGCCTTGATTGTGACTTTCTTGGCATTTGTAGTGCCCTTGCC
CTACTATATAGAGGTTCCAGGTGGTTCGGAAGATATTCGCCAAGTCCTTAAAGTCAATGACACAGAAGATAAGGAAGCTG
GTGCCTATCACTTTGTTACGGTTGGTGTCCAGCATGCCACATTAGCTCATATGGTTTATGCTTGGTTGACGCCTTTTACA
GATATTCGTAGTGTCCAGGAGACCACAGGTGGAACTTCCGATGTAGAATTTATGCGGATCAATCAATTCTACATGCAAAC
ATCGCAAAATATGGCCAAGTATCAAGGTCTAAAAACAGCTGGTAAGGATATCGAACTCAAGTACTTTGGGGTTTATGTCT
TGAATGTGACGGATAATTCAACCTTTAAAGGGATTCTCAATATCTCTGATACGGTCACAGCAGTCAATGATCAGACCTTT
GATAGTTCCAAAGACTTGATTGATTACGTCAGTTCTCAAAAATTAGGGGACTCCGTCAAGGTCACCTATGAAGAGGATGG
GCAAACCAAGTCTGCAGAAGGAAAGATTATCAGCTTGGAAAATGGAAAAAATGGGATTGGAATCGGCTTGATTGATCGTA
CAGAGGTAATCAGCAATGTCCCAATTAGTTTTTCAACAGCTGGTATCGGCGGTCCAAGTGCAGGTCTTATGTTTAGTTTA
GCTATCTATACCCAAATAGCTGACCCTGGTCTTCGTAATGGTCGTATCGTTGCCGGTACAGGAACTATTGACCGCGATGG
CAATGTGGGGGACATTGGAGGTATTGATAAGAAAGTTGTAGCTTCGGCTAGAGAAGGTGCTGCGATTTTCTTTGCCCCGG
ATAACCCTGTTAGCGAAGAAGAACAAAAAGCGCATCCGGATGCTAAAAACAACTACCAAACAGCCCTGGAAGCAGCTAGA
ACAATCAAGACAGATATGAAAATTGTGCCAGTTAAAACCCTACAGGATGCAATTGATTACTTGAAAAACAATCCCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

58.772

99.13

0.583


Multiple sequence alignment