Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   ACLV7H_RS08580 Genome accession   NZ_OZ217340
Coordinates   1683889..1685649 (-) Length   586 a.a.
NCBI ID   WP_411866938.1    Uniprot ID   -
Organism   Streptococcus oralis isolate S. oralis A22     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1678889..1690649
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLV7H_RS08540 (SORA22_17200) - 1679038..1679232 (-) 195 WP_000709165.1 hypothetical protein -
  ACLV7H_RS08545 (SORA22_17210) - 1679229..1679438 (-) 210 WP_045593067.1 hypothetical protein -
  ACLV7H_RS08550 (SORA22_17220) - 1679564..1681231 (-) 1668 WP_045593066.1 DAK2 domain-containing protein -
  ACLV7H_RS08555 (SORA22_17230) - 1681234..1681599 (-) 366 WP_000216432.1 Asp23/Gls24 family envelope stress response protein -
  ACLV7H_RS08560 (SORA22_17240) rpmB 1681752..1681940 (-) 189 WP_001140948.1 50S ribosomal protein L28 -
  ACLV7H_RS08565 (SORA22_17250) - 1682049..1682723 (-) 675 WP_045593047.1 LiaF transmembrane domain-containing protein -
  ACLV7H_RS08570 (SORA22_17260) - 1682729..1683175 (-) 447 WP_411866936.1 LytTR family DNA-binding domain-containing protein -
  ACLV7H_RS08575 (SORA22_17270) - 1683289..1683792 (-) 504 WP_411866937.1 phosphatase PAP2 family protein -
  ACLV7H_RS08580 (SORA22_17280) rcrQ 1683889..1685649 (-) 1761 WP_411866938.1 ABC transporter ATP-binding protein Regulator
  ACLV7H_RS08585 (SORA22_17290) rcrP 1685639..1687408 (-) 1770 WP_411866939.1 ABC transporter ATP-binding protein Regulator
  ACLV7H_RS08590 (SORA22_17300) - 1687392..1687853 (-) 462 WP_045617722.1 MarR family winged helix-turn-helix transcriptional regulator -
  ACLV7H_RS08595 (SORA22_17310) - 1688031..1688321 (-) 291 WP_007520704.1 hypothetical protein -
  ACLV7H_RS08600 (SORA22_17320) - 1688412..1689266 (-) 855 WP_025172565.1 PTS system mannose/fructose/sorbose family transporter subunit IID -
  ACLV7H_RS08605 (SORA22_17330) - 1689250..1690095 (-) 846 WP_033605823.1 PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC -
  ACLV7H_RS08610 (SORA22_17340) - 1690123..1690617 (-) 495 WP_004193690.1 PTS system mannose/fructose/N-acetylgalactosamine-transporter subunit IIB -

Sequence

Protein


Download         Length: 586 a.a.        Molecular weight: 64749.46 Da        Isoelectric Point: 5.3307

>NTDB_id=1169980 ACLV7H_RS08580 WP_411866938.1 1683889..1685649(-) (rcrQ) [Streptococcus oralis isolate S. oralis A22]
MENKKTSFWKHSRPFLAGLQLPLLVAVIAAVCSSIITVYGPTKIKEITNLISDGLMTGIDLEAVSSIASFLVILYVIGII
LNYTQAYIFSTNIQHFSKRLRTAIAEKINRLPLGYFDRHSQGDTLSRVTNDVDTAAQSLNQSLGTVISASFLLIAVLVTM
FSMNWILALVTVVSTLVGFAAVSVIMAKSQGYFKAQQNNLAAVNGYVEEMYSGHNVVTSYNAVDTSKAKFAGLNQNLHDS
IWKSQFISGIMMPAMFFVGNFSYVLVIIVGAALALEGHISIGIIVAFMVYVRTFSQPLSQIAQGITSLQQASAAMTRVFE
FLGEEEMEDESHKERQLTNMKGEVVFDQVSFGYTPERTIIHDFSATARAGQKVAIVGPTGAGKTTIVNLLMKFYEIDKGS
IRIDGVDTKDMKRSEVHDAFSMVLQDTWLFEGTIRENLIYNQTGISDERMMEASKAVGIHHFIMTLPDGYDTILDDTVTL
SVGQKQLLTIARALFKDAPLLILDEATSSVDTRTEELIQKAMDRLMEGRTSFVIAHRLSTIRNANLILVMKDGNIIEQGN
HEELMGQAGFYADLYNSQFTEDQAEE

Nucleotide


Download         Length: 1761 bp        

>NTDB_id=1169980 ACLV7H_RS08580 WP_411866938.1 1683889..1685649(-) (rcrQ) [Streptococcus oralis isolate S. oralis A22]
ATGGAAAATAAGAAAACGTCCTTTTGGAAACACTCTAGACCTTTTCTAGCAGGTCTCCAACTTCCCCTACTCGTAGCGGT
TATCGCAGCTGTATGTTCTAGTATCATCACGGTTTATGGACCGACTAAGATTAAGGAAATTACCAACTTGATTTCAGATG
GCTTGATGACAGGAATCGACTTGGAAGCTGTGTCAAGTATTGCTAGCTTTTTGGTCATTCTATATGTGATTGGTATTATC
CTTAACTATACACAAGCCTATATCTTTTCAACCAACATTCAGCATTTTTCAAAACGCTTGCGGACAGCAATCGCTGAAAA
AATCAATCGCTTGCCACTGGGGTATTTTGACCGTCATTCTCAAGGGGACACCCTTTCGCGCGTGACCAATGACGTGGATA
CGGCGGCGCAATCTCTCAACCAAAGTCTCGGAACAGTTATCTCAGCCAGCTTCTTGTTGATTGCTGTTTTGGTGACCATG
TTTAGCATGAACTGGATTTTAGCTCTGGTAACGGTTGTTTCTACGCTTGTTGGTTTTGCGGCAGTTTCCGTAATTATGGC
CAAGTCACAGGGTTATTTTAAAGCCCAACAAAATAATCTAGCAGCCGTCAATGGTTACGTAGAAGAAATGTATTCGGGAC
ACAATGTTGTAACGAGCTACAACGCAGTAGACACCTCCAAAGCGAAATTCGCAGGTTTAAACCAAAACTTGCACGACAGT
ATCTGGAAATCTCAGTTTATCTCTGGTATCATGATGCCAGCCATGTTCTTTGTTGGAAACTTTAGTTATGTTTTGGTCAT
CATCGTTGGTGCTGCCTTAGCGCTAGAGGGGCATATCAGTATCGGGATTATCGTAGCCTTTATGGTCTATGTTCGTACCT
TCTCACAACCCTTATCACAAATTGCTCAAGGGATTACGAGCTTGCAACAAGCCAGTGCAGCTATGACGCGTGTCTTTGAG
TTTCTAGGTGAAGAGGAAATGGAAGATGAATCTCATAAGGAAAGACAATTAACCAACATGAAGGGTGAAGTAGTCTTTGA
TCAGGTGTCATTTGGCTATACACCAGAGCGCACCATCATCCATGACTTCTCAGCTACAGCTCGTGCAGGTCAAAAGGTCG
CTATTGTCGGACCGACTGGTGCTGGTAAGACAACTATTGTCAATCTTTTGATGAAATTTTATGAGATTGATAAGGGAAGT
ATCCGTATCGATGGCGTGGATACTAAGGACATGAAGCGTTCGGAAGTGCATGATGCCTTTTCAATGGTCTTGCAAGATAC
TTGGCTCTTTGAAGGAACCATTCGGGAAAATCTCATCTATAATCAAACGGGTATCAGCGATGAGCGAATGATGGAAGCTA
GTAAGGCTGTGGGAATCCACCACTTTATCATGACCTTACCAGACGGCTACGATACTATCTTGGACGATACAGTGACCCTG
TCTGTCGGACAAAAACAACTCTTAACCATTGCTCGTGCCCTGTTCAAGGACGCACCACTCTTGATTTTAGATGAGGCGAC
CTCTTCTGTTGACACACGGACAGAGGAGTTGATTCAAAAAGCCATGGACCGCTTGATGGAAGGCAGAACTTCCTTTGTCA
TTGCCCACCGCTTGTCAACTATCCGTAATGCCAACTTGATTCTTGTCATGAAAGATGGCAATATCATCGAGCAAGGTAAC
CATGAAGAATTGATGGGCCAAGCCGGCTTCTATGCGGATCTTTACAACAGCCAATTCACAGAAGACCAAGCAGAAGAATA
A

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(23-298)

ABC transporter (ABC_tran)

(361-508)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

66.267

99.659

0.66

Multiple sequence alignment