Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   ACLV7H_RS08585 Genome accession   NZ_OZ217340
Coordinates   1685639..1687408 (-) Length   589 a.a.
NCBI ID   WP_411866939.1    Uniprot ID   -
Organism   Streptococcus oralis isolate S. oralis A22     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1680639..1692408
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLV7H_RS08555 (SORA22_17230) - 1681234..1681599 (-) 366 WP_000216432.1 Asp23/Gls24 family envelope stress response protein -
  ACLV7H_RS08560 (SORA22_17240) rpmB 1681752..1681940 (-) 189 WP_001140948.1 50S ribosomal protein L28 -
  ACLV7H_RS08565 (SORA22_17250) - 1682049..1682723 (-) 675 WP_045593047.1 LiaF transmembrane domain-containing protein -
  ACLV7H_RS08570 (SORA22_17260) - 1682729..1683175 (-) 447 WP_411866936.1 LytTR family DNA-binding domain-containing protein -
  ACLV7H_RS08575 (SORA22_17270) - 1683289..1683792 (-) 504 WP_411866937.1 phosphatase PAP2 family protein -
  ACLV7H_RS08580 (SORA22_17280) rcrQ 1683889..1685649 (-) 1761 WP_411866938.1 ABC transporter ATP-binding protein Regulator
  ACLV7H_RS08585 (SORA22_17290) rcrP 1685639..1687408 (-) 1770 WP_411866939.1 ABC transporter ATP-binding protein Regulator
  ACLV7H_RS08590 (SORA22_17300) - 1687392..1687853 (-) 462 WP_045617722.1 MarR family winged helix-turn-helix transcriptional regulator -
  ACLV7H_RS08595 (SORA22_17310) - 1688031..1688321 (-) 291 WP_007520704.1 hypothetical protein -
  ACLV7H_RS08600 (SORA22_17320) - 1688412..1689266 (-) 855 WP_025172565.1 PTS system mannose/fructose/sorbose family transporter subunit IID -
  ACLV7H_RS08605 (SORA22_17330) - 1689250..1690095 (-) 846 WP_033605823.1 PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC -
  ACLV7H_RS08610 (SORA22_17340) - 1690123..1690617 (-) 495 WP_004193690.1 PTS system mannose/fructose/N-acetylgalactosamine-transporter subunit IIB -
  ACLV7H_RS08615 (SORA22_17350) - 1690661..1691098 (-) 438 WP_007520708.1 PTS sugar transporter subunit IIA -

Sequence

Protein


Download         Length: 589 a.a.        Molecular weight: 65310.71 Da        Isoelectric Point: 6.0427

>NTDB_id=1169981 ACLV7H_RS08585 WP_411866939.1 1685639..1687408(-) (rcrP) [Streptococcus oralis isolate S. oralis A22]
MKKLAKHITGKEWGMILLTVLFTCFSVYLELEVPTYISEITELIGTPGTELGQLWSPAAKMMGLSLLAFLSSVTVGFFAS
RVAASYTTHLRRDIFNRVLDFSQTEIKRFSIPSLLTRATNDITQVQMLFTMGLQVVTRGPIMAIWAIGKILGKSEYWLWA
VVVAVIVNVLMTTVLITLAFPKQSVIQKLTDKLNSITRESLTGIRVVRAYNAEDYQDKKFEEANDEVTRLNLFVNRLMAI
MNPIMMAISSGLTLAIYWIGAYIINDASLAERLPLFSDMVVFMSYAMQVVMGFLLMGALFIVLPRTLVSAGRINQVLDLH
PSIENPSQAQAANSSVQGQVEFRDVTFRYSQNSEAVVEHVTFKAEAGQTVAFIGSTGSGKSTLVNLLPRFYDVSAGEILV
DGVNVQDYDLVDLRNKVGYIPQKAVLFSGDVKDNLDFGKSKETPLGEAAMWQALELAQSKNFIEDKEAGLASEVAQGGTN
FSGGQRQRLAIARALARKPEILIFDDSFSALDYKTDRILRQELAEKTKSMTKLIVAQRISTIMDADLILVLDQGKVVGQG
THKELLATNEVYQEIAYSQLSKEELEHGK

Nucleotide


Download         Length: 1770 bp        

>NTDB_id=1169981 ACLV7H_RS08585 WP_411866939.1 1685639..1687408(-) (rcrP) [Streptococcus oralis isolate S. oralis A22]
ATGAAGAAACTCGCTAAACATATTACAGGAAAAGAGTGGGGGATGATCCTACTCACTGTTCTTTTCACTTGTTTCTCGGT
CTATCTCGAGTTAGAAGTGCCGACCTATATTTCAGAAATAACAGAATTGATTGGAACACCGGGTACGGAGTTAGGACAAC
TATGGTCTCCTGCTGCCAAGATGATGGGCTTATCTCTCCTAGCCTTTCTGTCTTCTGTAACAGTTGGATTTTTTGCTTCT
CGTGTTGCAGCGTCTTACACGACTCACTTGCGAAGAGATATTTTTAATCGTGTTCTAGATTTTTCGCAAACGGAAATCAA
ACGTTTTTCAATCCCCAGTCTTTTGACTCGAGCGACCAATGATATTACGCAGGTTCAGATGCTCTTTACTATGGGCTTAC
AGGTAGTGACTCGTGGGCCTATCATGGCCATCTGGGCCATTGGAAAAATCCTTGGGAAGTCGGAATACTGGCTCTGGGCA
GTAGTGGTGGCCGTCATTGTCAATGTCTTGATGACCACTGTTCTCATTACTCTAGCCTTTCCAAAACAATCTGTCATTCA
AAAATTGACAGATAAACTCAATAGCATCACTCGCGAAAGTTTGACAGGGATTCGGGTTGTTCGTGCTTATAATGCCGAGG
ATTACCAAGATAAGAAATTTGAAGAAGCCAATGATGAGGTGACTCGTCTCAATCTCTTTGTCAATCGATTGATGGCGATT
ATGAACCCTATTATGATGGCGATTTCCAGCGGTTTGACCTTAGCCATTTACTGGATTGGTGCCTATATCATCAACGATGC
AAGTTTGGCAGAACGTCTGCCACTCTTTAGTGATATGGTGGTCTTCATGTCCTATGCTATGCAGGTCGTGATGGGCTTCC
TTCTCATGGGAGCACTCTTTATCGTTCTTCCTCGTACCTTGGTTTCTGCAGGACGTATCAATCAAGTATTGGATTTGCAT
CCTTCTATTGAGAATCCGAGTCAAGCACAGGCTGCAAATTCTTCAGTTCAAGGACAAGTGGAATTCCGTGACGTAACCTT
CCGCTACTCTCAAAACTCAGAAGCGGTTGTGGAACATGTTACTTTTAAAGCCGAAGCAGGTCAAACAGTTGCTTTTATTG
GATCAACTGGATCTGGGAAATCTACTCTAGTCAACCTACTACCTCGTTTTTACGATGTATCCGCGGGAGAAATTCTAGTA
GATGGTGTTAATGTGCAAGATTACGACTTGGTAGACTTGCGCAATAAGGTTGGCTATATTCCGCAGAAAGCAGTCCTCTT
CTCAGGAGATGTTAAGGACAATCTAGATTTTGGTAAGAGCAAAGAAACTCCTCTAGGCGAAGCTGCTATGTGGCAAGCTC
TGGAATTAGCCCAGTCTAAAAACTTTATCGAGGATAAGGAAGCAGGTCTGGCCTCTGAAGTAGCCCAAGGCGGAACCAAC
TTCTCAGGAGGTCAAAGACAGCGTTTGGCCATTGCGCGTGCCTTGGCTCGTAAGCCAGAGATTCTTATCTTTGATGACTC
TTTCTCAGCCTTGGACTACAAGACAGACCGGATCTTGCGCCAAGAGCTAGCAGAGAAAACAAAATCTATGACCAAGCTCA
TCGTAGCACAGCGGATTTCTACCATCATGGATGCCGACCTGATCTTAGTATTGGATCAAGGTAAAGTCGTGGGACAAGGC
ACCCACAAGGAACTTCTTGCAACCAACGAAGTCTACCAAGAAATTGCCTACTCACAACTATCGAAGGAGGAATTGGAACA
TGGAAAATAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(56-292)

ABC transporter (ABC_tran)

(358-507)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

65.391

100

0.667

Multiple sequence alignment