Detailed information    

insolico Bioinformatically predicted

Overview


Name   pepF   Type   Regulator
Locus tag   ACLV7H_RS04565 Genome accession   NZ_OZ217340
Coordinates   856081..857883 (+) Length   600 a.a.
NCBI ID   WP_411866489.1    Uniprot ID   -
Organism   Streptococcus oralis isolate S. oralis A22     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context


Location: 851081..862883
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLV7H_RS04545 (SORA22_09100) smpB 852363..852830 (+) 468 WP_001051742.1 SsrA-binding protein SmpB -
  ACLV7H_RS04550 (SORA22_09110) tehB 852845..853705 (+) 861 WP_000413062.1 SAM-dependent methyltransferase TehB -
  ACLV7H_RS04555 (SORA22_09120) - 853881..855029 (+) 1149 WP_411866487.1 hypothetical protein -
  ACLV7H_RS04560 (SORA22_09130) coiA 855106..856062 (+) 957 WP_411866488.1 competence protein CoiA Machinery gene
  ACLV7H_RS04565 (SORA22_09140) pepF 856081..857883 (+) 1803 WP_411866489.1 oligoendopeptidase F Regulator
  ACLV7H_RS04570 (SORA22_09150) - 857885..858598 (+) 714 WP_000230408.1 O-methyltransferase -
  ACLV7H_RS04575 (SORA22_09160) prsA 858666..859607 (+) 942 WP_000728083.1 peptidylprolyl isomerase PrsA -
  ACLV7H_RS04580 (SORA22_09170) ftsW 859796..861019 (+) 1224 WP_000703343.1 cell division peptidoglycan polymerase FtsW -

Sequence


Protein


Download         Length: 600 a.a.        Molecular weight: 69863.89 Da        Isoelectric Point: 4.6459

>NTDB_id=1169959 ACLV7H_RS04565 WP_411866489.1 856081..857883(+) (pepF) [Streptococcus oralis isolate S. oralis A22]
MVLQRHEINEKDTWDLSTIYPTDQAWEEALKDLTEKVQTAAQYEGHLLDSADSLLEITEFSLDLERQVEKLYVYAHMKND
QDTREAKYQEYYAKAMTLYSQLEQAFSFYEPEFMEIREEQYAAFLEAQPKLQVYKHFFDKLLQKKDHVLSQREEELLAGA
GEIFGSASETFAILDNADISFPYVLDDEGKEVQLSHGTYIRLMESKNREVRRGAYEALYATYEQFQHTYAKTLQTNVKVQ
NYRAKVRNYKSARHAALAANFVPESVYDNLVAAVRKHLPLLHRYLNLRSKILGISDLKMYDVYTPLSLVDYSFTYEEALK
KAEEALAVLGDDYLSRVKRAFSERWIDVYENQGKRSGAYSGGSYDTNAFMLLNWQDNLDNLFTLVHETGHSMHSSYTRET
QPYVYGDYSIFLAEIASTTNENILTEKLLEEVEDDATRFAILNNFLDGFRGTVFRQTQFAEFEHAIHQADQNGEVLTSDF
LNKLYADLNQEYYGLSKEDNPQIQYEWARIPHFYYNYYVYQYSTGFAAASALAEKIVHGSQEDRDRYIDYLKAGKSDYPL
NVMRKAGVDMEKEDYLNDAFAVFERRLNEFEALVEKLGLA

Nucleotide


Download         Length: 1803 bp        

>NTDB_id=1169959 ACLV7H_RS04565 WP_411866489.1 856081..857883(+) (pepF) [Streptococcus oralis isolate S. oralis A22]
ATGGTATTACAACGACATGAAATAAATGAAAAAGATACATGGGATCTTTCGACAATCTACCCAACAGACCAGGCTTGGGA
AGAAGCCTTGAAAGATTTAACTGAAAAAGTACAAACAGCAGCCCAGTATGAGGGACATCTCTTGGACAGCGCAGACAGTT
TGCTTGAGATCACAGAATTCTCACTCGATTTGGAACGCCAAGTTGAAAAGCTTTATGTCTATGCGCATATGAAAAATGAC
CAGGACACGCGTGAAGCCAAGTATCAAGAGTACTATGCTAAGGCAATGACCCTATACAGTCAGTTAGAACAAGCCTTTTC
ATTCTATGAACCTGAGTTTATGGAGATTAGGGAAGAGCAGTATGCGGCCTTCCTAGAAGCTCAACCAAAACTCCAAGTTT
ACAAGCACTTTTTTGACAAGCTCTTGCAAAAGAAAGACCATGTTCTTTCGCAACGTGAGGAAGAATTGCTTGCTGGAGCA
GGAGAAATCTTCGGTTCTGCTAGTGAAACTTTCGCTATTTTGGACAATGCGGATATTAGCTTCCCATACGTCCTTGATGA
TGAAGGCAAGGAAGTGCAACTCTCACACGGTACTTACATCCGCTTGATGGAGTCTAAAAACCGTGAAGTGCGTCGTGGTG
CCTATGAAGCTCTCTATGCGACATACGAGCAATTCCAACACACTTATGCTAAGACCTTGCAGACAAATGTTAAGGTGCAA
AACTACCGTGCCAAAGTTCGCAACTATAAGAGTGCTCGCCATGCAGCCCTCGCAGCAAACTTTGTTCCAGAAAGTGTCTA
TGACAATCTAGTAGCAGCAGTTCGCAAGCATTTGCCACTCTTGCATCGTTACCTTAACCTTCGTTCTAAAATCTTGGGAA
TTTCAGATCTCAAGATGTATGATGTCTACACACCACTCTCGTTAGTAGATTATAGCTTTACCTACGAAGAAGCCTTGAAA
AAGGCAGAAGAGGCCTTGGCGGTCTTGGGTGACGACTACTTGAGCCGTGTTAAACGTGCCTTCAGTGAGCGTTGGATTGA
TGTCTATGAAAACCAAGGCAAGCGTTCTGGTGCCTACTCTGGTGGTTCTTATGATACTAATGCCTTCATGCTTCTCAACT
GGCAGGACAATCTAGATAATCTCTTTACCCTTGTCCATGAAACAGGTCACAGTATGCACTCAAGCTATACTCGTGAAACG
CAGCCTTATGTTTACGGAGATTACTCTATCTTCTTGGCTGAGATTGCCTCAACGACCAATGAAAATATCTTGACAGAGAA
ATTGTTGGAAGAAGTAGAAGACGATGCGACACGCTTTGCTATTCTCAATAACTTCCTAGACGGTTTCCGTGGAACAGTCT
TCCGTCAAACTCAATTCGCTGAGTTTGAACATGCCATCCACCAAGCAGACCAAAATGGAGAAGTCTTGACCAGCGATTTC
CTCAATAAACTCTACGCTGACTTGAACCAAGAGTACTATGGACTCAGCAAGGAAGACAATCCTCAGATCCAATACGAGTG
GGCGCGCATTCCACACTTCTACTATAACTACTATGTTTATCAGTATTCAACAGGTTTTGCAGCTGCTTCAGCCTTGGCTG
AGAAGATTGTCCATGGTAGTCAAGAAGATCGTGACCGCTATATCGACTACCTCAAGGCAGGTAAGTCAGACTATCCGCTC
AATGTTATGAGAAAAGCGGGTGTTGATATGGAAAAAGAAGACTATCTTAACGATGCCTTTGCAGTCTTTGAACGTCGCTT
GAACGAGTTTGAAGCCCTTGTTGAAAAATTGGGACTAGCTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

67.282

99.333

0.668


Multiple sequence alignment