Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   ACLV7H_RS01485 Genome accession   NZ_OZ217340
Coordinates   261734..262771 (+) Length   345 a.a.
NCBI ID   WP_049501597.1    Uniprot ID   A0A3R9MUS5
Organism   Streptococcus oralis isolate S. oralis A22     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 256734..267771
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLV7H_RS01450 (SORA22_02820) yidC 256769..257698 (-) 930 WP_411867064.1 membrane protein insertase YidC -
  ACLV7H_RS01455 (SORA22_02830) - 257776..258054 (-) 279 WP_045593602.1 acylphosphatase -
  ACLV7H_RS01460 (SORA22_02840) - 258088..258828 (+) 741 WP_411866168.1 TrmH family RNA methyltransferase -
  ACLV7H_RS01465 (SORA22_02850) - 258883..259566 (+) 684 WP_045593599.1 Bax inhibitor-1/YccA family protein -
  ACLV7H_RS01470 (SORA22_02860) asnA 259676..260668 (+) 993 WP_045593598.1 aspartate--ammonia ligase -
  ACLV7H_RS01475 (SORA22_02870) rsmD 260733..261272 (+) 540 WP_411866169.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  ACLV7H_RS01480 (SORA22_02880) coaD 261262..261750 (+) 489 WP_411866170.1 pantetheine-phosphate adenylyltransferase -
  ACLV7H_RS01485 (SORA22_02890) sepM 261734..262771 (+) 1038 WP_049501597.1 SepM family pheromone-processing serine protease Regulator
  ACLV7H_RS01490 - 262827..263057 (+) 231 WP_411866171.1 DUF1146 family protein -
  ACLV7H_RS01495 (SORA22_02900) - 263118..264161 (+) 1044 WP_411866172.1 acyltransferase family protein -
  ACLV7H_RS01500 (SORA22_02910) murA 264173..265456 (+) 1284 WP_411866173.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  ACLV7H_RS01505 (SORA22_02920) - 265443..265637 (+) 195 WP_000739701.1 DNA-directed RNA polymerase subunit beta -
  ACLV7H_RS01510 (SORA22_02930) endA 265678..266502 (+) 825 WP_045593588.1 DNA/RNA non-specific endonuclease Machinery gene

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 37525.72 Da        Isoelectric Point: 5.5304

>NTDB_id=1169937 ACLV7H_RS01485 WP_049501597.1 261734..262771(+) (sepM) [Streptococcus oralis isolate S. oralis A22]
MKKKTRWPLYVILALVLTFLAFVVPLPYYIEVPGGAEDIRRVLKVNETEDTEAGAYQFVTVGIRHATLSHLVYAWLTPFT
DIRSAKETTGGSTDAEFMRINQFYMQTSQNMAKYQGLKTAGKDIELKYLGVYVLTVTDNSTFKGILNIADTVTAVNDKTF
DSSKDLVDYVNSQQLGDTVKVTYEEDGKVKSAEGKIITLENGKNGIGIGLIDRTEVTSDVPIRFSTAGIGGPSAGLMFSL
AIYTQIADPGLRNGRVVAGTGTIDRDGNVGDIGGIDKKVVAASRQGANIFFAPDNPVTEEAKKADPNAKSNYETALEAAK
TIKTEMKIVPVKTLQDAIDYLKNNP

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=1169937 ACLV7H_RS01485 WP_049501597.1 261734..262771(+) (sepM) [Streptococcus oralis isolate S. oralis A22]
ATGAAGAAAAAAACTAGATGGCCCTTATATGTCATCCTAGCACTAGTATTGACTTTTTTAGCCTTTGTAGTACCTTTACC
TTACTACATAGAAGTTCCAGGTGGAGCGGAAGATATTCGTCGCGTTTTGAAAGTCAATGAAACAGAAGACACAGAAGCAG
GAGCTTACCAGTTTGTAACAGTCGGCATTCGACATGCAACCCTGTCGCATCTTGTCTATGCTTGGCTAACGCCTTTCACA
GATATTAGAAGTGCCAAGGAGACTACGGGTGGCTCTACTGATGCAGAATTTATGCGGATCAATCAGTTCTATATGCAAAC
TTCTCAAAACATGGCCAAGTATCAAGGATTGAAGACGGCTGGAAAGGATATCGAACTCAAGTACTTGGGAGTTTATGTCT
TAACTGTGACGGACAATTCAACTTTTAAGGGCATTCTGAACATTGCAGATACCGTGACGGCTGTTAACGACAAAACGTTT
GATAGTTCAAAAGACTTGGTCGACTATGTCAACTCTCAACAATTAGGGGACACGGTCAAGGTAACCTATGAAGAAGACGG
AAAAGTCAAGTCTGCAGAAGGTAAAATTATCACTCTCGAAAACGGGAAAAACGGTATTGGGATTGGTTTGATTGACCGTA
CGGAAGTGACCAGTGACGTTCCAATTCGCTTTTCAACAGCTGGTATCGGCGGGCCAAGTGCCGGTCTTATGTTTAGTCTA
GCTATTTACACCCAGATAGCAGATCCAGGACTTCGTAATGGTCGCGTCGTTGCGGGAACGGGAACCATTGATCGCGATGG
AAATGTTGGCGACATCGGTGGAATTGATAAAAAAGTAGTTGCAGCCTCTCGTCAGGGAGCCAACATCTTTTTTGCTCCTG
ACAATCCAGTCACCGAGGAAGCAAAAAAAGCAGATCCCAATGCGAAAAGCAACTATGAAACAGCCCTAGAAGCTGCTAAA
ACGATCAAAACAGAGATGAAAATCGTTCCCGTTAAGACCTTGCAGGATGCGATTGATTACCTTAAAAACAATCCCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A3R9MUS5

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

59.649

99.13

0.591


Multiple sequence alignment