Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | ACNUEH_RS12110 | Genome accession | NZ_OZ197095 |
| Coordinates | 2527938..2528318 (+) | Length | 126 a.a. |
| NCBI ID | WP_000836911.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii isolate 23S01404-6 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2522938..2533318
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACNUEH_RS12080 | kdsB | 2523841..2524602 (+) | 762 | WP_000680697.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| ACNUEH_RS12085 | - | 2524614..2525594 (+) | 981 | WP_001075416.1 | DNA polymerase III subunit delta' | - |
| ACNUEH_RS12090 | - | 2525606..2525947 (+) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| ACNUEH_RS12095 | - | 2525965..2526738 (+) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| ACNUEH_RS12100 | - | 2526776..2527384 (+) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| ACNUEH_RS12105 | - | 2527394..2527948 (+) | 555 | WP_000841374.1 | type II secretion system protein | - |
| ACNUEH_RS12110 | xcpV | 2527938..2528318 (+) | 381 | WP_000836911.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| ACNUEH_RS12115 | xcpW | 2528318..2529019 (+) | 702 | WP_416631595.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| ACNUEH_RS12120 | gspK | 2529019..2529978 (+) | 960 | WP_000301468.1 | type II secretion system minor pseudopilin GspK | - |
| ACNUEH_RS12125 | - | 2530208..2530804 (+) | 597 | WP_000908453.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| ACNUEH_RS12130 | ung | 2530855..2531568 (+) | 714 | WP_001177528.1 | uracil-DNA glycosylase | - |
| ACNUEH_RS12135 | - | 2531565..2532689 (+) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| ACNUEH_RS12140 | tadA | 2532696..2533199 (+) | 504 | WP_031949880.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13975.20 Da Isoelectric Point: 9.8004
>NTDB_id=1169458 ACNUEH_RS12110 WP_000836911.1 2527938..2528318(+) (xcpV) [Acinetobacter baumannii isolate 23S01404-6]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=1169458 ACNUEH_RS12110 WP_000836911.1 2527938..2528318(+) (xcpV) [Acinetobacter baumannii isolate 23S01404-6]
ATGAAATCTAAAGGTTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCTGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACTCAGTCCACTTCAAATGCAATTTTGCGAACTAAAGCTCAGTTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACTCAAAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGTTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCTGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACTCAGTCCACTTCAAATGCAATTTTGCGAACTAAAGCTCAGTTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACTCAAAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |