Detailed information NTG1169439

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: ACNUEH_RS04985
• Genome accession: NZ_OZ197095
• Coordinates: 1034991..1036412 (-)
• Length: 473 a.a.
• NCBI ID: WP_272298909.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii isolate 23S01404-6
• Function: regulation of type IV pilus assembly (predicted from homology) Competence regulation

Genomic Context

Location: 1029991..1041412

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACNUEH_RS04970	lptG	1031044..1032114 (+)	1071	WP_000881094.1	LPS export ABC transporter permease LptG	-
ACNUEH_RS04975	gpmI	1032240..1033787 (+)	1548	WP_000128749.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	-
ACNUEH_RS04980	-	1033803..1034987 (+)	1185	WP_416632333.1	S41 family peptidase	-
ACNUEH_RS04985	pilR	1034991..1036412 (-)	1422	WP_272298909.1	sigma-54-dependent transcriptional regulator	Regulator
ACNUEH_RS04990	pilS	1036437..1038005 (-)	1569	WP_057065334.1	sensor histidine kinase	Regulator
ACNUEH_RS04995	-	1038016..1038651 (-)	636	WP_000633799.1	response regulator	-
ACNUEH_RS05000	pbpG	1038864..1039910 (+)	1047	WP_001984577.1	D-alanyl-D-alanine endopeptidase PBP7/8	-
ACNUEH_RS05005	thrC	1040019..1041158 (-)	1140	WP_000063593.1	threonine synthase	-

Sequence

Protein

• Length: 473 a.a.
• Molecular weight: 53057.27 Da
• Isoelectric Point: 6.5588

>NTDB_id=1169439 ACNUEH_RS04985 WP_272298909.1 1034991..1036412(-) (pilR) [Acinetobacter baumannii isolate 23S01404-6]
MAEQQPLVLLVDDEEDLCLLMQMTLARMGIKTHLAYRVEQAKQLFTQFHYDACLTDLNLPDGSGIDLVKHVSQNYPNTPI
AVLTAYGNMDIAIAALKAGAFDFVSKPVNQVHLDQLLQKALNRQKVEHDFAENALENKLLIGCSLPIQQLRIAIKKIARS
QAPVFVTGESGTGKEVVANLVHRLSNRSEGPFIAINCGAIPTELMESELFGHKKGSFTGATQDKQGLILSAHGGSLFLDE
IAELPLSMQVKLLRAVQEKKIRPVGSDQEIDVDFRVISASHQDLDLLVRQGKFRQDLFFRIHVMDLILPPLRERGEDVLL
LANHFIQKICMEWETPPKQLTEAAETYLLQQHFPGNVRELRNMIERAITLSEDTTIDVSHLHPAPLRANISNPFASVAQS
IQTTVAAPQVVKKLPSEGLERYLENIEKDILLNALNMTHWNRTLAAKKLGMTFRSLRYRLKKFGLDTETEQEV

Nucleotide

• Length: 1422 bp

>NTDB_id=1169439 ACNUEH_RS04985 WP_272298909.1 1034991..1036412(-) (pilR) [Acinetobacter baumannii isolate 23S01404-6]
ATGGCAGAACAGCAACCACTGGTTTTGCTTGTAGACGATGAAGAAGATTTGTGCCTTTTAATGCAAATGACACTTGCACG
AATGGGGATTAAAACACATCTTGCTTATCGGGTTGAACAGGCCAAACAACTCTTCACTCAGTTTCATTACGATGCGTGTT
TAACCGACTTAAACCTACCCGATGGGAGCGGGATAGATTTAGTTAAACATGTCTCTCAAAATTATCCCAACACTCCGATT
GCGGTTTTAACTGCTTACGGCAATATGGATATTGCAATTGCAGCATTAAAAGCAGGTGCTTTTGATTTTGTAAGCAAACC
GGTCAACCAAGTACATCTAGATCAATTATTACAAAAAGCCTTGAATCGGCAAAAAGTAGAGCATGATTTTGCCGAGAATG
CGTTAGAAAATAAATTATTAATCGGTTGTTCTCTGCCTATTCAACAGTTACGCATCGCAATTAAAAAAATTGCTCGCTCT
CAAGCACCGGTATTTGTTACCGGTGAGTCTGGAACAGGTAAAGAAGTAGTTGCCAATTTGGTTCATCGGCTGAGTAACCG
TAGTGAAGGCCCTTTTATTGCGATTAACTGCGGTGCCATTCCAACTGAACTGATGGAAAGTGAGCTATTTGGGCATAAAA
AAGGTAGCTTTACCGGAGCAACTCAAGATAAACAAGGCCTCATTTTATCGGCACACGGTGGCAGTTTATTTTTAGATGAA
ATTGCCGAATTACCTTTAAGTATGCAGGTCAAACTGCTCCGTGCAGTACAGGAAAAAAAGATCCGACCTGTCGGTTCAGA
TCAGGAAATCGATGTTGATTTCCGTGTGATTAGTGCAAGTCATCAAGATTTAGATTTATTGGTTAGACAGGGCAAATTCC
GTCAAGATTTATTTTTCCGTATTCACGTTATGGACCTCATATTGCCGCCTCTACGTGAACGTGGCGAAGATGTCCTTTTG
CTTGCCAATCACTTTATTCAGAAAATTTGTATGGAGTGGGAAACGCCACCTAAACAATTAACAGAAGCGGCCGAAACTTA
TCTGCTACAGCAACACTTTCCGGGTAATGTTCGTGAATTAAGAAATATGATTGAGCGCGCAATTACCTTAAGTGAAGATA
CCACTATAGATGTATCTCATTTACATCCTGCTCCACTAAGAGCAAATATTTCTAATCCTTTTGCTTCGGTTGCTCAAAGC
ATACAAACCACTGTGGCAGCTCCTCAAGTCGTAAAAAAATTACCAAGTGAAGGCTTAGAACGTTATTTAGAAAATATTGA
AAAAGATATTTTACTCAATGCACTCAATATGACTCATTGGAATCGTACCTTAGCAGCTAAAAAATTAGGAATGACTTTCC
GCTCTTTACGCTATCGTCTGAAAAAATTTGGCTTAGATACGGAGACAGAACAGGAAGTATAA

Domains

Predicted by InterproScan.

• Sigma-54 interaction domain (Sigma54_activat) (141-306)

• Response regulator receiver domain (Response_reg) (8-117)

• Bacterial regulatory protein, Fis family (HTH_8) (423-463)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Acinetobacter baumannii strain A118	98.309	100	0.983
pilR	Pseudomonas aeruginosa PAK	50.98	97.04	0.495