Detailed information    

insolico Bioinformatically predicted

Overview

Name   dprA   Type   Machinery gene
Locus tag   ACNUEA_RS02260 Genome accession   NZ_OZ197093
Coordinates   425171..426043 (+) Length   290 a.a.
NCBI ID   WP_374750084.1    Uniprot ID   -
Organism   Staphylococcus aureus isolate 23S01465-3     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 420171..431043
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACNUEA_RS02230 - 420317..421084 (+) 768 WP_000176395.1 ribonuclease HII -
  ACNUEA_RS02235 sucC 421193..422359 (+) 1167 WP_179366441.1 ADP-forming succinate--CoA ligase subunit beta -
  ACNUEA_RS02240 sucD 422381..423289 (+) 909 WP_374915289.1 succinate--CoA ligase subunit alpha -
  ACNUEA_RS02245 - 423516..423584 (+) 69 WP_374731670.1 YSIRK-type signal peptide-containing protein -
  ACNUEA_RS02250 - 423574..423726 (+) 153 Protein_438 cell wall hydrolase -
  ACNUEA_RS02255 fmhC 423754..424998 (+) 1245 Protein_439 FemA/FemB family glycyltransferase FmhC -
  ACNUEA_RS02260 dprA 425171..426043 (+) 873 WP_374750084.1 DNA-processing protein DprA Machinery gene
  ACNUEA_RS02265 topA 426217..428292 (+) 2076 WP_001807811.1 type I DNA topoisomerase -
  ACNUEA_RS02270 trmFO 428448..429755 (+) 1308 WP_000195254.1 methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO -

Sequence

Protein


Download         Length: 290 a.a.        Molecular weight: 33607.03 Da        Isoelectric Point: 9.5142

>NTDB_id=1169346 ACNUEA_RS02260 WP_374750084.1 425171..426043(+) (dprA) [Staphylococcus aureus isolate 23S01465-3]
MIRLFLLKLYWAHFSTKQIHQFLMAYPNVIKEEGRKKDSYLCEWVNREENVHLLRKYYAFIKLDHNDIIKELQKLKVSYI
TYMDTEYPVLLKEIYQFPLLLFYKGNIKLINNMHHLAVVGARDSTSYTQQSLEFLLSNDKSKYLTIVSGLAQGADAMAHQ
IALKYNLPTIAVLAFGHQTHYPKSTLALRNKIEEKGLVISEYPPHTPIAKYRFPERNRIISGLSKGVLITEAKEQSGSHI
TIDFALEQNRNVYVLPGSMFNPMTKGNLLRIQEGAKVVLNANDIFEDYYI

Nucleotide


Download         Length: 873 bp        

>NTDB_id=1169346 ACNUEA_RS02260 WP_374750084.1 425171..426043(+) (dprA) [Staphylococcus aureus isolate 23S01465-3]
TTGATTAGACTATTTTTGCTTAAGTTATACTGGGCACACTTTTCGACTAAACAAATTCATCAATTTTTAATGGCATATCC
TAATGTAATTAAAGAGGAGGGCAGAAAAAAAGATAGTTATTTATGTGAATGGGTGAATAGGGAAGAAAATGTTCATTTAT
TACGTAAATACTATGCTTTTATAAAACTTGATCATAACGATATTATTAAAGAACTGCAGAAATTAAAAGTAAGTTACATT
ACATATATGGATACTGAATACCCAGTGCTATTAAAAGAAATATATCAATTTCCATTACTTCTTTTCTATAAAGGGAACAT
CAAATTAATAAATAATATGCATCATTTGGCTGTAGTAGGTGCAAGAGATTCTACAAGTTATACCCAACAGTCTTTAGAAT
TTTTATTATCAAATGATAAAAGCAAATATTTAACAATTGTTTCCGGCCTTGCTCAAGGAGCTGATGCAATGGCACATCAA
ATAGCTTTAAAATACAATCTCCCTACAATAGCAGTTTTAGCCTTTGGCCATCAAACACATTATCCCAAAAGTACATTAGC
ATTAAGAAATAAAATAGAAGAAAAAGGTTTAGTTATATCCGAATATCCACCACATACACCAATTGCTAAATATAGATTTC
CTGAGCGCAATAGAATTATCAGCGGTTTGTCAAAAGGGGTTTTAATTACTGAGGCTAAGGAACAAAGTGGCAGTCACATC
ACGATAGATTTTGCATTAGAGCAAAATAGAAATGTTTATGTTTTACCTGGATCTATGTTTAATCCTATGACAAAAGGTAA
TTTATTACGTATCCAAGAAGGTGCTAAGGTAGTATTAAACGCTAATGATATATTTGAAGACTACTATATTTAA

Domains

Predicted by InterproScan.

DNA recombination-mediator protein A (DNA_processg_A)

(72-279)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Staphylococcus aureus MW2

99.31

100

0.993
  dprA Staphylococcus aureus N315

98.966

100

0.99

Multiple sequence alignment