Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   ACNUDV_RS00670 Genome accession   NZ_OZ197092
Coordinates   128371..129357 (+) Length   328 a.a.
NCBI ID   WP_000959279.1    Uniprot ID   A0A2S6DCY7
Organism   Staphylococcus aureus isolate 23S00050-1     
Function   require for natural transformation (predicted from homology)   
Unclear

Genomic Context

Location: 123371..134357
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACNUDV_RS00650 - 123739..125361 (+) 1623 WP_000406183.1 peptide ABC transporter substrate-binding protein -
  ACNUDV_RS00655 trpS 125481..126470 (-) 990 WP_000448934.1 tryptophan--tRNA ligase -
  ACNUDV_RS00660 spxA 126765..127160 (+) 396 WP_000258003.1 transcriptional regulator SpxA -
  ACNUDV_RS00665 mecA 127531..128250 (+) 720 WP_001217731.1 adaptor protein MecA -
  ACNUDV_RS00670 coiA 128371..129357 (+) 987 WP_000959279.1 competence protein CoiA Machinery gene
  ACNUDV_RS00675 pepF 129405..131213 (+) 1809 WP_000082727.1 oligoendopeptidase F -
  ACNUDV_RS00680 yjbH 131673..132479 (-) 807 WP_000896695.1 protease adaptor protein YjbH -
  ACNUDV_RS00685 - 132502..132867 (-) 366 WP_000214070.1 truncated hemoglobin YjbI -
  ACNUDV_RS00690 - 132971..133564 (-) 594 WP_000224612.1 CYTH domain-containing protein -
  ACNUDV_RS00695 - 133750..134097 (+) 348 WP_001242104.1 hypothetical protein -

Sequence

Protein


Download         Length: 328 a.a.        Molecular weight: 38800.32 Da        Isoelectric Point: 9.4277

>NTDB_id=1169298 ACNUDV_RS00670 WP_000959279.1 128371..129357(+) (coiA) [Staphylococcus aureus isolate 23S00050-1]
MLVALNEEKERVLATTALRKTQYFCPVCGKQVILKRGLKVISHFAHKHLAEQKCFNNESIKHYKSKLILAQMIQQQGCKV
EIEPFLKEIKQIPDILINNKYVIELQYSPISYKQILQRTEGLKKMGYKVSWLLNDVDYCHNKVKFNHFQSMFINPITRKL
HTFNLEKKQIMMFQQIQYIGGHKYVAEKRNVKMSELFNEAPCDYHAVYKLSKFAINQYIKYCRWQNSVLEPTLSAMYQLQ
LTDQEVVHNYGYIFPEQIYIENHPIEWQLQVDLWLKNGESILVSDNLNYFKLKKFIVALESKTAIIEKLINNYLNISSDR
GNDVQILF

Nucleotide


Download         Length: 987 bp        

>NTDB_id=1169298 ACNUDV_RS00670 WP_000959279.1 128371..129357(+) (coiA) [Staphylococcus aureus isolate 23S00050-1]
ATGTTAGTAGCTTTAAATGAAGAAAAGGAACGCGTGTTAGCAACTACTGCATTGAGAAAGACACAATATTTTTGTCCGGT
GTGTGGCAAGCAAGTTATTTTAAAGCGTGGGCTCAAAGTAATTAGTCATTTTGCACATAAACATTTAGCGGAACAAAAAT
GTTTTAATAATGAATCGATTAAACATTATAAAAGTAAATTGATTTTAGCACAGATGATACAGCAACAAGGATGTAAAGTA
GAGATAGAGCCATTTTTAAAAGAAATAAAACAAATTCCGGATATTTTGATTAATAATAAATATGTTATTGAGCTACAGTA
TTCGCCAATTTCTTATAAACAGATTCTTCAACGAACGGAAGGTTTAAAGAAAATGGGATATAAAGTAAGTTGGTTATTAA
ATGATGTTGATTATTGTCATAATAAAGTGAAGTTCAATCATTTTCAAAGTATGTTTATTAATCCAATCACTCGAAAACTT
CATACGTTCAATTTAGAGAAAAAACAAATAATGATGTTTCAACAAATACAATATATAGGCGGGCACAAATATGTCGCTGA
AAAAAGGAATGTCAAAATGAGTGAGTTGTTTAATGAGGCGCCTTGTGATTATCATGCTGTTTATAAATTATCAAAATTCG
CAATTAATCAATATATCAAATATTGTCGCTGGCAAAATTCTGTTTTAGAACCCACTTTAAGTGCAATGTATCAATTACAG
TTAACTGATCAAGAAGTAGTGCACAATTATGGTTATATTTTTCCAGAGCAAATTTATATTGAAAATCATCCAATTGAGTG
GCAATTACAAGTTGATTTATGGTTAAAGAATGGAGAAAGCATATTAGTAAGTGACAATCTTAATTATTTTAAACTGAAAA
AGTTTATTGTTGCTCTAGAAAGTAAAACAGCGATTATAGAAAAACTTATTAACAATTATTTAAATATTAGTTCAGATAGA
GGTAATGACGTGCAAATTTTGTTCTAA

Domains

Predicted by InterproScan.

Competence protein CoiA-like family (CoiA_nuc)

(6-308)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2S6DCY7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Staphylococcus aureus N315

96.037

100

0.96
  coiA Staphylococcus aureus MW2

96.037

100

0.96

Multiple sequence alignment