Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   ACNUD4_RS10195 Genome accession   NZ_OZ197090
Coordinates   1978742..1979728 (+) Length   328 a.a.
NCBI ID   WP_000959279.1    Uniprot ID   A0A2S6DCY7
Organism   Staphylococcus aureus isolate 23S01467-1     
Function   require for natural transformation (predicted from homology)   
Unclear

Genomic Context

Location: 1973742..1984728
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACNUD4_RS10175 - 1974110..1975732 (+) 1623 WP_000406183.1 peptide ABC transporter substrate-binding protein -
  ACNUD4_RS10180 trpS 1975852..1976841 (-) 990 WP_000448934.1 tryptophan--tRNA ligase -
  ACNUD4_RS10185 spxA 1977136..1977531 (+) 396 WP_000258003.1 transcriptional regulator SpxA -
  ACNUD4_RS10190 mecA 1977902..1978621 (+) 720 WP_001217731.1 adaptor protein MecA -
  ACNUD4_RS10195 coiA 1978742..1979728 (+) 987 WP_000959279.1 competence protein CoiA Machinery gene
  ACNUD4_RS10200 pepF 1979776..1981584 (+) 1809 WP_000082727.1 oligoendopeptidase F -
  ACNUD4_RS10205 yjbH 1982044..1982850 (-) 807 WP_000896695.1 protease adaptor protein YjbH -
  ACNUD4_RS10210 - 1982873..1983238 (-) 366 WP_000214070.1 truncated hemoglobin YjbI -
  ACNUD4_RS10215 - 1983342..1983935 (-) 594 WP_000224612.1 CYTH domain-containing protein -
  ACNUD4_RS10220 - 1984121..1984468 (+) 348 WP_001242104.1 hypothetical protein -

Sequence

Protein


Download         Length: 328 a.a.        Molecular weight: 38800.32 Da        Isoelectric Point: 9.4277

>NTDB_id=1169234 ACNUD4_RS10195 WP_000959279.1 1978742..1979728(+) (coiA) [Staphylococcus aureus isolate 23S01467-1]
MLVALNEEKERVLATTALRKTQYFCPVCGKQVILKRGLKVISHFAHKHLAEQKCFNNESIKHYKSKLILAQMIQQQGCKV
EIEPFLKEIKQIPDILINNKYVIELQYSPISYKQILQRTEGLKKMGYKVSWLLNDVDYCHNKVKFNHFQSMFINPITRKL
HTFNLEKKQIMMFQQIQYIGGHKYVAEKRNVKMSELFNEAPCDYHAVYKLSKFAINQYIKYCRWQNSVLEPTLSAMYQLQ
LTDQEVVHNYGYIFPEQIYIENHPIEWQLQVDLWLKNGESILVSDNLNYFKLKKFIVALESKTAIIEKLINNYLNISSDR
GNDVQILF

Nucleotide


Download         Length: 987 bp        

>NTDB_id=1169234 ACNUD4_RS10195 WP_000959279.1 1978742..1979728(+) (coiA) [Staphylococcus aureus isolate 23S01467-1]
ATGTTAGTAGCTTTAAATGAAGAAAAGGAACGCGTGTTAGCAACTACTGCATTGAGAAAGACACAATATTTTTGTCCGGT
GTGTGGCAAGCAAGTTATTTTAAAGCGTGGGCTCAAAGTAATTAGTCATTTTGCACATAAACATTTAGCGGAACAAAAAT
GTTTTAATAATGAATCGATTAAACATTATAAAAGTAAATTGATTTTAGCACAGATGATACAGCAACAAGGATGTAAAGTA
GAGATAGAGCCATTTTTAAAAGAAATAAAACAAATTCCGGATATTTTGATTAATAATAAATATGTTATTGAGCTACAGTA
TTCGCCAATTTCTTATAAACAGATTCTTCAACGAACGGAAGGTTTAAAGAAAATGGGATATAAAGTAAGTTGGTTATTAA
ATGATGTTGATTATTGTCATAATAAAGTGAAGTTCAATCATTTTCAAAGTATGTTTATTAATCCAATCACTCGAAAACTT
CATACGTTCAATTTAGAGAAAAAACAAATAATGATGTTTCAACAAATACAATATATAGGCGGGCACAAATATGTCGCTGA
AAAAAGGAATGTCAAAATGAGTGAGTTGTTTAATGAGGCGCCTTGTGATTATCATGCTGTTTATAAATTATCAAAATTCG
CAATTAATCAATATATCAAATATTGTCGCTGGCAAAATTCTGTTTTAGAACCCACTTTAAGTGCAATGTATCAATTACAG
TTAACTGATCAAGAAGTAGTGCACAATTATGGTTATATTTTTCCAGAGCAAATTTATATTGAAAATCATCCAATTGAGTG
GCAATTACAAGTTGATTTATGGTTAAAGAATGGAGAAAGCATATTAGTAAGTGACAATCTTAATTATTTTAAACTGAAAA
AGTTTATTGTTGCTCTAGAAAGTAAAACAGCGATTATAGAAAAACTTATTAACAATTATTTAAATATTAGTTCAGATAGA
GGTAATGACGTGCAAATTTTGTTCTAA

Domains

Predicted by InterproScan.

Competence protein CoiA-like family (CoiA_nuc)

(6-308)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2S6DCY7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Staphylococcus aureus N315

96.037

100

0.96
  coiA Staphylococcus aureus MW2

96.037

100

0.96

Multiple sequence alignment