Detailed information    

insolico Bioinformatically predicted

Overview

Name   dprA   Type   Machinery gene
Locus tag   ACNUEF_RS11395 Genome accession   NZ_OZ197087
Coordinates   2232890..2233762 (+) Length   290 a.a.
NCBI ID   WP_000620182.1    Uniprot ID   -
Organism   Staphylococcus aureus isolate 23S00037-1     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 2227890..2238762
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACNUEF_RS11365 - 2228036..2228803 (+) 768 WP_000176395.1 ribonuclease HII -
  ACNUEF_RS11370 sucC 2228912..2230078 (+) 1167 WP_001020801.1 ADP-forming succinate--CoA ligase subunit beta -
  ACNUEF_RS11375 sucD 2230100..2231008 (+) 909 WP_031775869.1 succinate--CoA ligase subunit alpha -
  ACNUEF_RS11380 - 2231235..2231303 (+) 69 WP_374731670.1 YSIRK-type signal peptide-containing protein -
  ACNUEF_RS11385 - 2231293..2231445 (+) 153 Protein_2196 cell wall hydrolase -
  ACNUEF_RS11390 fmhC 2231473..2232717 (+) 1245 Protein_2197 FemA/FemB family glycyltransferase FmhC -
  ACNUEF_RS11395 dprA 2232890..2233762 (+) 873 WP_000620182.1 DNA-processing protein DprA Machinery gene
  ACNUEF_RS11400 topA 2233936..2236011 (+) 2076 WP_001807811.1 type I DNA topoisomerase -
  ACNUEF_RS11405 trmFO 2236167..2237474 (+) 1308 WP_000195254.1 methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO -

Sequence

Protein


Download         Length: 290 a.a.        Molecular weight: 33534.97 Da        Isoelectric Point: 9.6076

>NTDB_id=1169112 ACNUEF_RS11395 WP_000620182.1 2232890..2233762(+) (dprA) [Staphylococcus aureus isolate 23S00037-1]
MIRLFLLKLYWAHFSTKQIHQFLMAYPNVIKEGGRKKDSYLCEWVNREENVHLLRKYYAFIKLDHNDIIKELQKLKVSYI
TYMDTEYPVLLKEIYQFPLLLFYKGNIKLINNMHHLAVVGARDSTSYTQQSLEFLLSNDKSKYLTIVSGLAQGADAMAHQ
IALKYNLPTIAVLAFGHQTHYPKSTLALRNKIEEKGLVISEYPPHTPIAKYRFPERNRIISGLSKGVLITEAKEQSGSHI
TIDFALEQNRNVYVLPGSMFNPMTKGNLLRIQEGAKVVLNANDIFEDYYI

Nucleotide


Download         Length: 873 bp        

>NTDB_id=1169112 ACNUEF_RS11395 WP_000620182.1 2232890..2233762(+) (dprA) [Staphylococcus aureus isolate 23S00037-1]
TTGATTAGACTATTTTTGCTTAAGTTATACTGGGCACACTTTTCGACTAAACAAATTCATCAATTTTTAATGGCATATCC
TAATGTAATTAAAGAGGGGGGCAGAAAAAAAGATAGTTATTTATGTGAATGGGTGAATAGGGAAGAAAATGTTCATTTAT
TACGTAAATACTATGCTTTTATAAAACTTGATCATAACGATATTATTAAAGAACTGCAGAAATTAAAAGTAAGTTACATT
ACATATATGGATACTGAATACCCAGTGCTATTAAAAGAAATATATCAATTTCCATTACTTCTTTTCTATAAAGGGAACAT
CAAATTAATAAATAATATGCATCATTTGGCTGTAGTAGGTGCAAGAGATTCTACAAGTTATACCCAACAGTCTTTAGAAT
TTTTATTATCAAATGATAAAAGCAAATATTTAACAATTGTTTCCGGCCTTGCTCAAGGAGCTGATGCAATGGCACATCAA
ATAGCTTTAAAATACAATCTCCCTACAATAGCAGTTTTAGCCTTTGGCCATCAAACACATTATCCCAAAAGTACATTAGC
ATTAAGAAATAAAATAGAAGAAAAAGGTTTAGTTATATCCGAATATCCACCACATACACCAATTGCTAAATATAGATTTC
CTGAGCGCAATAGAATTATCAGCGGTTTGTCAAAAGGGGTTTTAATTACTGAGGCTAAGGAACAAAGTGGCAGTCACATC
ACGATAGATTTTGCATTAGAGCAAAATAGAAATGTTTATGTTTTACCTGGATCTATGTTTAATCCTATGACAAAAGGTAA
TTTATTACGTATCCAAGAAGGTGCTAAGGTAGTATTAAACGCTAATGATATATTTGAAGACTACTATATTTAA

Domains

Predicted by InterproScan.

DNA recombination-mediator protein A (DNA_processg_A)

(72-279)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Staphylococcus aureus MW2

98.966

100

0.99
  dprA Staphylococcus aureus N315

98.621

100

0.986

Multiple sequence alignment