Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   ACNUEC_RS13625 Genome accession   NZ_OZ197083
Coordinates   2681530..2682216 (-) Length   228 a.a.
NCBI ID   WP_001825349.1    Uniprot ID   -
Organism   Staphylococcus aureus isolate 23S01949-1     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2676530..2687216
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACNUEC_RS13605 rpsT 2677444..2677695 (+) 252 WP_001274017.1 30S ribosomal protein S20 -
  ACNUEC_RS13610 holA 2677740..2678714 (-) 975 WP_001282570.1 DNA polymerase III subunit delta -
  ACNUEC_RS13615 comEC 2678771..2680972 (-) 2202 WP_001807826.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  ACNUEC_RS13620 - 2680977..2681438 (-) 462 WP_000439690.1 ComE operon protein 2 -
  ACNUEC_RS13625 comEA 2681530..2682216 (-) 687 WP_001825349.1 ComEA family DNA-binding protein Machinery gene
  ACNUEC_RS13630 - 2682256..2682972 (-) 717 WP_000084838.1 class I SAM-dependent DNA methyltransferase -
  ACNUEC_RS13635 rsfS 2682975..2683328 (-) 354 WP_001088020.1 ribosome silencing factor -
  ACNUEC_RS13640 yqeK 2683329..2683913 (-) 585 WP_001019324.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  ACNUEC_RS13645 nadD 2683903..2684472 (-) 570 WP_000725164.1 nicotinate (nicotinamide) nucleotide adenylyltransferase -
  ACNUEC_RS13650 yhbY 2684475..2684765 (-) 291 WP_000955234.1 ribosome assembly RNA-binding protein YhbY -
  ACNUEC_RS13655 aroE 2684769..2685575 (-) 807 WP_000666746.1 shikimate dehydrogenase -
  ACNUEC_RS13660 yqeH 2685589..2686689 (-) 1101 WP_001280151.1 ribosome biogenesis GTPase YqeH -

Sequence

Protein


Download         Length: 228 a.a.        Molecular weight: 25783.41 Da        Isoelectric Point: 9.3305

>NTDB_id=1168949 ACNUEC_RS13625 WP_001825349.1 2681530..2682216(-) (comEA) [Staphylococcus aureus isolate 23S01949-1]
MVLLYQFLLRYKDFLTQWKLYIISAVVLIMVLIGFIFWRQDDYTSRDFENKDTALKQSTSENSSLSKLEDVQVKDGDDSK
NKGPVYVDIKGAVKHPNVYKMTSKDRVVDLLDKAQLLDDADVSQINLSEKLTDQKMIFIPHKGQKNVEPQFGANSVHVKN
GNTNNTKVNLNTASVSELMSVPGVGQAKANAIVEYRNQQGAFQEIDDLKKVKGFGSKTFDKLKSYFTT

Nucleotide


Download         Length: 687 bp        

>NTDB_id=1168949 ACNUEC_RS13625 WP_001825349.1 2681530..2682216(-) (comEA) [Staphylococcus aureus isolate 23S01949-1]
GTGGTTTTATTGTATCAATTTTTATTACGCTATAAAGATTTTTTAACTCAATGGAAGTTATATATTATAAGTGCTGTTGT
TTTAATTATGGTATTAATTGGTTTTATATTCTGGAGACAAGATGATTATACTTCAAGAGATTTTGAAAATAAAGATACTG
CTCTGAAACAAAGCACTAGTGAAAATAGTAGTTTGTCCAAATTAGAAGATGTCCAGGTCAAAGATGGAGATGATTCCAAA
AATAAAGGTCCTGTATATGTCGATATAAAAGGTGCTGTTAAACATCCTAATGTTTATAAAATGACATCTAAGGATAGAGT
AGTTGATTTACTTGATAAAGCACAATTATTAGATGATGCAGATGTAAGTCAAATTAATTTGTCTGAAAAATTAACAGATC
AAAAAATGATTTTCATTCCTCATAAAGGACAAAAGAATGTTGAACCACAATTTGGAGCAAACAGTGTGCACGTAAAAAAT
GGGAACACAAATAATACTAAAGTAAATTTAAATACGGCATCTGTATCAGAATTGATGTCTGTTCCTGGAGTAGGGCAAGC
TAAAGCTAATGCAATTGTTGAATATCGCAACCAACAAGGTGCATTTCAAGAAATTGACGATTTGAAAAAAGTAAAAGGTT
TTGGAAGTAAAACTTTTGATAAACTGAAATCTTATTTCACGACATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(164-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Staphylococcus aureus MW2

96.476

99.561

0.961
  comEA Staphylococcus aureus N315

96.476

99.561

0.961

Multiple sequence alignment