Detailed information NTG1168046

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: ACFEL6_RS16165
• Genome accession: NZ_OZ183475
• Coordinates: 2086299..2089679 (+)
• Length: 1126 a.a.
• NCBI ID: WP_375321187.1
• Uniprot ID: -
• Organism: Aliivibrio logei isolate 622f83115ee5131b54a8b4d1
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 2081299..2094679

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACFEL6_RS16145	erpA	2081771..2082112 (-)	342	WP_045101254.1	iron-sulfur cluster insertion protein ErpA	-
ACFEL6_RS16150	hemL	2082347..2083642 (+)	1296	WP_375321184.1	glutamate-1-semialdehyde 2,1-aminomutase	-
ACFEL6_RS16155	-	2083904..2084989 (+)	1086	WP_375321185.1	AI-2E family transporter	-
ACFEL6_RS16160	rsmC	2085115..2086134 (+)	1020	WP_375321186.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
ACFEL6_RS16165	chiS	2086299..2089679 (+)	3381	WP_375321187.1	response regulator	Regulator
ACFEL6_RS16170	-	2090492..2092165 (+)	1674	WP_105055448.1	ABC transporter substrate-binding protein	-
ACFEL6_RS16175	-	2092310..2093296 (+)	987	WP_105055449.1	ABC transporter permease	-
ACFEL6_RS16180	-	2093299..2094324 (+)	1026	WP_060994147.1	ABC transporter permease	-

Sequence

Protein

• Length: 1126 a.a.
• Molecular weight: 126875.74 Da
• Isoelectric Point: 5.9918

>NTDB_id=1168046 ACFEL6_RS16165 WP_375321187.1 2086299..2089679(+) (chiS) [Aliivibrio logei isolate 622f83115ee5131b54a8b4d1]
MEKKQHFKRLQNTLMLAFLVLSITPLSIIAIFFLHSHSQDLATQSTAHLVSLRDNKEQQVSNYFKARESEVFGFARSELA
NASGGRFYGLISAFPSLGTSIENARKNAQLRYIEGSGDKVRTSILPESDSYIGSERYRLLHKRYHWAYQELLKRSDFTDI
LLVDINGNVVYSTKKEDNYGTNLLTGKYKGTSLEKTYSHVRTMVENSKNKDNIPVIFSDFSYVNGESISWFAAPIVQQGY
LHSFVLFKLPNTGLANLLDNTQENTSIKTYFVGEDSYSRISTSDTDKNLSKNMAAALSGKTDVGSFMDKNEQKVLAAFTA
IHIDDHTWGLSIELPEKEAFARIQQLEQIFIIAMIIAIVSVVIASHFLSNSITAPLLRLTWAAERVSAGDLDQDMISTDR
KDEIGRLAVSFARMQRSIREKIQLIKAQNEELEANLTVIQNKNNELEAADKLKDEFLATTSHELRTPLHGMVGIAEALYT
GANGPISASHKHQLEIIINSGQRLTNLVNDLLDYHKMRHGNLDINRHVADLSSATSLVLELSQHLLGHKSIRIINQVDKS
LPSVYADEQRLEQVLYNLIGNAIKYTSEGKIVISASVIDQFLRVQVVDTGHGIPADELEHIFEPLIQAGHDSNRYRQGSG
LGLSISRQLIELMGGSLYVSSQPMVGATFSFTIPLATKAQIQQYKQFSKEDIAHYQTPEILEYNLDELAEKSPENPDGPL
LLVADDEPVNLQVLSSFLRLEGYRVKTANDGPETLQVLQEEKPELLLLDVMMPGMSGYEVCQSLRQQYDHSQLPIIMLTA
LNQTQDRIRGFESGANDYLSKPFNKQELAARIKAHLQASQAEVFLNENGRLQQEIRHREKIEASLLETQAHILEQLNHAH
EAIVCAKNDGYIQYVNQSAAKLFQRTEEQLSRYTIDELIAKRSLIENKQNYRGNIDVYIDGSIEQINADLLHLPAESGLS
LMLIVSHTHEASEQRIHDLENAVEALSAFAFEGDKQKLDSLSLVGGDIAQLANKANENKEDKGIIMRELIVDGMTSGLTY
WEEGTGQTKYTLAEESGLWRVYLDRSTLQTRTLDKYLRVETLPKTPRWRTVISTLEYILDHCELHNPQRDKLIRIKDKLK
ILISSN

Nucleotide

• Length: 3381 bp

>NTDB_id=1168046 ACFEL6_RS16165 WP_375321187.1 2086299..2089679(+) (chiS) [Aliivibrio logei isolate 622f83115ee5131b54a8b4d1]
ATGGAAAAAAAACAACACTTTAAACGTCTTCAAAATACGTTAATGCTAGCATTCCTCGTGTTAAGTATTACACCACTTTC
AATTATTGCTATTTTCTTTCTTCACTCTCATAGCCAAGATCTAGCAACACAAAGTACCGCTCACCTTGTTTCATTACGAG
ACAATAAAGAACAACAAGTTAGTAATTACTTTAAAGCCAGAGAATCTGAAGTCTTCGGTTTTGCTCGTTCAGAATTAGCG
AATGCAAGTGGTGGCCGATTCTATGGTTTAATCAGCGCATTCCCTAGCTTAGGAACATCGATAGAGAACGCAAGAAAAAA
TGCTCAATTACGATATATCGAAGGTTCTGGAGATAAAGTTCGAACCAGTATTTTACCTGAATCAGATTCATATATTGGCA
GTGAACGTTATCGCCTTCTACATAAACGTTATCATTGGGCTTATCAAGAGTTACTCAAACGTTCTGATTTTACAGATATA
TTACTTGTTGATATCAATGGTAATGTCGTCTATTCAACTAAAAAAGAAGATAACTACGGTACCAACTTACTGACAGGTAA
ATATAAAGGAACCTCATTAGAAAAGACTTATAGCCACGTGCGAACTATGGTTGAAAACTCTAAAAACAAAGACAACATAC
CTGTTATATTTTCAGACTTTTCTTATGTAAATGGTGAAAGTATCTCGTGGTTTGCAGCTCCTATTGTCCAGCAAGGTTAT
TTACATAGTTTCGTATTATTTAAGCTACCAAATACAGGACTTGCAAACCTCTTAGATAACACTCAAGAAAATACATCAAT
TAAAACCTACTTCGTTGGTGAAGACTCTTATTCGCGTATTAGTACAAGCGATACAGATAAAAATTTATCTAAAAACATGG
CGGCTGCATTATCAGGAAAAACCGATGTCGGTAGCTTCATGGATAAAAACGAGCAAAAAGTGCTGGCAGCTTTCACTGCA
ATACATATAGATGATCACACATGGGGCTTATCTATAGAGCTACCAGAGAAAGAAGCTTTTGCTCGCATACAACAACTAGA
ACAGATTTTTATTATTGCTATGATTATCGCGATAGTCAGCGTTGTTATTGCCTCTCATTTTTTATCAAACTCAATAACCG
CCCCTTTATTAAGATTAACATGGGCAGCAGAACGAGTATCTGCAGGAGATTTAGATCAAGATATGATCAGCACTGACAGA
AAAGATGAAATTGGTCGCCTTGCGGTAAGCTTTGCCCGTATGCAACGTTCTATCAGAGAGAAAATCCAATTAATTAAAGC
TCAAAATGAGGAGCTTGAAGCAAACTTAACGGTTATCCAAAATAAAAATAACGAATTAGAAGCTGCTGATAAATTAAAAG
ATGAATTCCTAGCCACTACATCTCATGAATTAAGAACCCCTTTACATGGCATGGTCGGTATTGCTGAAGCACTTTACACA
GGTGCTAATGGGCCGATATCTGCATCTCATAAGCACCAATTAGAGATCATAATTAATAGCGGCCAACGATTAACAAACCT
TGTTAATGATTTACTGGATTACCATAAGATGCGCCATGGTAATTTAGATATTAATCGACATGTGGCCGATCTTTCTTCAG
CAACAAGCTTAGTTCTTGAATTATCACAACATTTATTAGGCCACAAATCGATTCGTATCATTAATCAAGTCGATAAATCA
TTACCTTCGGTTTACGCCGATGAACAACGACTTGAACAAGTTTTATATAACTTAATTGGTAATGCGATTAAGTACACTTC
AGAGGGTAAAATAGTTATATCTGCAAGTGTTATTGACCAATTTTTACGAGTTCAAGTCGTTGATACTGGACATGGGATCC
CTGCGGATGAATTAGAGCATATCTTTGAACCTTTAATACAAGCAGGACATGACTCTAACCGTTATCGTCAAGGCTCAGGA
CTTGGTTTATCCATTAGTCGTCAATTAATCGAGTTAATGGGAGGTTCTTTATATGTAAGTAGCCAGCCTATGGTTGGAGC
GACATTTAGCTTCACAATCCCTTTAGCAACAAAAGCACAAATCCAGCAATACAAACAATTTTCTAAAGAAGATATTGCTC
ATTATCAAACGCCTGAAATATTAGAATATAATTTAGATGAATTAGCTGAAAAATCACCAGAAAACCCTGACGGTCCTTTA
TTACTTGTTGCGGATGATGAACCAGTAAATCTTCAAGTATTAAGCAGTTTTTTAAGGTTAGAAGGCTACCGAGTTAAAAC
TGCAAATGATGGACCTGAGACTTTACAAGTACTACAAGAAGAAAAACCAGAATTGCTTCTTCTCGATGTTATGATGCCTG
GAATGAGTGGTTATGAAGTATGTCAATCATTAAGACAACAATATGACCACTCACAACTTCCAATCATAATGCTGACGGCA
TTAAATCAAACCCAAGATCGCATTAGAGGATTTGAGTCAGGGGCAAATGATTATTTAAGTAAACCATTTAATAAACAAGA
ATTAGCAGCTCGAATTAAAGCACATCTTCAAGCAAGTCAGGCTGAAGTATTCCTTAACGAGAATGGGCGCTTACAGCAAG
AAATTCGTCACAGAGAGAAAATTGAAGCCAGTTTATTAGAAACTCAAGCTCACATACTCGAACAGCTCAATCATGCTCAT
GAAGCAATTGTGTGTGCAAAGAATGATGGATACATTCAATACGTAAACCAATCCGCCGCCAAGTTATTTCAAAGAACCGA
AGAGCAATTGTCTCGTTATACTATTGATGAGCTTATTGCAAAAAGAAGCTTAATTGAAAATAAACAAAATTACAGAGGCA
ACATTGATGTATACATTGACGGCAGTATCGAACAGATAAATGCTGATCTTTTGCATTTACCAGCAGAATCAGGGCTCTCA
TTAATGCTTATCGTTAGTCACACACATGAAGCCAGTGAGCAACGTATTCATGACTTAGAAAACGCCGTAGAGGCACTCTC
AGCCTTCGCATTTGAAGGAGATAAACAAAAACTAGATTCTTTATCATTGGTTGGAGGCGATATCGCTCAACTTGCTAATA
AAGCAAATGAGAACAAAGAAGATAAAGGCATCATTATGAGAGAACTTATTGTTGATGGTATGACATCAGGATTAACATAT
TGGGAAGAAGGTACAGGGCAAACAAAATACACTCTCGCAGAAGAGAGTGGATTATGGCGAGTTTATTTAGATAGAAGTAC
CTTACAAACACGAACTCTTGATAAATACCTCCGAGTTGAGACCCTACCAAAGACACCAAGATGGCGCACAGTCATTAGTA
CTCTTGAGTATATACTTGACCATTGTGAACTGCATAATCCTCAGCGAGATAAGCTAATTCGAATAAAAGATAAGCTAAAA
ATACTTATCTCATCCAACTAA

Domains

Predicted by InterproScan.

• HAMP domain (HAMP) (367-420)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (567-676)

• His Kinase A (phospho-acceptor) domain (HisKA) (453-520)

• Response regulator receiver domain (Response_reg) (722-833)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	63.717	100	0.639