Detailed information NTG0116739

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: AW02_RS17080
• Genome accession: NZ_CP007165
• Coordinates: 3534582..3535745 (-)
• Length: 387 a.a.
• NCBI ID: WP_003151385.1
• Uniprot ID: -
• Organism: Bacillus velezensis NJN-6
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3529582..3540745

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AW02_RS17050 (AW02_033720)	-	3529847..3530266 (-)	420	WP_003151392.1	TIGR03826 family flagellar region protein	-
AW02_RS17055 (AW02_033730)	comFC	3530340..3531029 (-)	690	WP_196616643.1	phosphoribosyltransferase family protein	Machinery gene
AW02_RS17060 (AW02_033740)	-	3531035..3531319 (-)	285	WP_003151389.1	late competence development ComFB family protein	-
AW02_RS17065 (AW02_033750)	comFA	3531377..3532762 (-)	1386	WP_024085865.1	DEAD/DEAH box helicase	Machinery gene
AW02_RS17070 (AW02_033760)	-	3532870..3533718 (-)	849	WP_024085866.1	DegV family protein	-
AW02_RS17075 (AW02_033770)	degU	3533816..3534505 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
AW02_RS17080 (AW02_033780)	degS	3534582..3535745 (-)	1164	WP_003151385.1	two-component sensor histidine kinase DegS	Regulator
AW02_RS17085 (AW02_033790)	-	3535968..3536615 (+)	648	WP_003151384.1	YigZ family protein	-
AW02_RS17090 (AW02_033800)	-	3536620..3537834 (+)	1215	WP_024085868.1	LCP family protein	-
AW02_RS17095 (AW02_033810)	-	3537924..3539000 (-)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
AW02_RS17100 (AW02_033820)	tuaH	3539133..3540329 (-)	1197	WP_024085869.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.82 Da
• Isoelectric Point: 7.1378

>NTDB_id=116739 AW02_RS17080 WP_003151385.1 3534582..3535745(-) (degS) [Bacillus velezensis NJN-6]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=116739 AW02_RS17080 WP_003151385.1 3534582..3535745(-) (degS) [Bacillus velezensis NJN-6]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTGAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGCTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCTACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAACATTCAGAATCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTTGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948