Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   AW02_RS07310 Genome accession   NZ_CP007165
Coordinates   1446374..1446838 (-) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus velezensis NJN-6     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1441374..1451838
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AW02_RS07295 (AW02_014200) - 1441854..1443674 (+) 1821 WP_015417363.1 PAS domain-containing protein -
  AW02_RS07300 (AW02_014210) - 1443650..1444869 (-) 1220 Protein_1427 aminotransferase A -
  AW02_RS20695 (AW02_014220) - 1445070..1445231 (-) 162 WP_007409608.1 hypothetical protein -
  AW02_RS07305 (AW02_014230) cheV 1445420..1446331 (+) 912 WP_007409609.1 chemotaxis protein CheV -
  AW02_RS07310 (AW02_014240) kre 1446374..1446838 (-) 465 WP_003154622.1 YkyB family protein Regulator
  AW02_RS07315 (AW02_014250) - 1446961..1448253 (-) 1293 WP_024085236.1 MFS transporter -
  AW02_RS07320 (AW02_014260) - 1448329..1448823 (-) 495 WP_088037173.1 L,D-transpeptidase family protein -
  AW02_RS07325 (AW02_014270) - 1448898..1449761 (-) 864 WP_024085238.1 metallophosphoesterase -
  AW02_RS07330 (AW02_014280) fadH 1449905..1450669 (+) 765 WP_003154618.1 2,4-dienoyl-CoA reductase -
  AW02_RS20915 - 1450779..1451324 (+) 546 Protein_1435 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=116702 AW02_RS07310 WP_003154622.1 1446374..1446838(-) (kre) [Bacillus velezensis NJN-6]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=116702 AW02_RS07310 WP_003154622.1 1446374..1446838(-) (kre) [Bacillus velezensis NJN-6]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929

Multiple sequence alignment