Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   AB3224_RS06420 Genome accession   NZ_OZ061585
Coordinates   1307935..1309212 (-) Length   425 a.a.
NCBI ID   WP_015473823.1    Uniprot ID   M5AET0
Organism   Levilactobacillus brevis isolate Levilactobacillus brevis CIRM-BIA2444     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1302935..1314212
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB3224_RS06415 - 1306190..1307899 (-) 1710 WP_011668017.1 proline--tRNA ligase -
  AB3224_RS06420 eeP 1307935..1309212 (-) 1278 WP_015473823.1 RIP metalloprotease RseP Regulator
  AB3224_RS06425 - 1309308..1310099 (-) 792 WP_011668019.1 phosphatidate cytidylyltransferase -
  AB3224_RS06430 - 1310121..1310909 (-) 789 WP_041815361.1 isoprenyl transferase -
  AB3224_RS06435 - 1311012..1311434 (-) 423 WP_011668021.1 hypothetical protein -
  AB3224_RS06440 frr 1311461..1312024 (-) 564 WP_024855604.1 ribosome recycling factor -
  AB3224_RS06445 pyrH 1312021..1312743 (-) 723 WP_011668022.1 UMP kinase -
  AB3224_RS06450 tsf 1312890..1313774 (-) 885 WP_011668023.1 translation elongation factor Ts -

Sequence


Protein


Download         Length: 425 a.a.        Molecular weight: 45969.23 Da        Isoelectric Point: 7.2020

>NTDB_id=1166332 AB3224_RS06420 WP_015473823.1 1307935..1309212(-) (eeP) [Levilactobacillus brevis isolate Levilactobacillus brevis CIRM-BIA2444]
MITTIITFIIVFGILVIVHEFGHFYFAKRGGILVREFSIGMGPKLVYHRGKDGTTYTLRLLPVGGYVRMAGAEDDEEELK
PGTPVSLYVGADEKVERINTSKKSTLFNGIPLEVTATDLEDELWIEGYENGDESAIKRYAVAHDATVIESDGTELQIAPK
DVQFQSASLGRRLMTNFAGPMNNILLAIVTFMLMSFAQGGVSMGTNQVQVADSPVSVAKQAGVKTNDKITAVNGRKTTSW
TDLSTAIQPLANKKTTLTIQRGSATKHITVTPKGETSNGKTVGMIGITQAQDKSIGAILASGFTQTWTMTKALFGALWHM
VSGHFSLNDLGGPVAIFATTSQATKFGLVGVLNFLAFLSINLAIVNLLPIPALDGGKILLNFIEAIRRKPLSENVEAAVT
LIGVGFLVLLMLLVTWNDIERYFIH

Nucleotide


Download         Length: 1278 bp        

>NTDB_id=1166332 AB3224_RS06420 WP_015473823.1 1307935..1309212(-) (eeP) [Levilactobacillus brevis isolate Levilactobacillus brevis CIRM-BIA2444]
GTGATTACAACGATTATTACCTTTATCATTGTCTTTGGGATTTTGGTCATTGTCCATGAATTCGGGCATTTTTACTTTGC
CAAGCGAGGCGGCATTCTCGTCCGTGAATTCTCGATTGGAATGGGGCCAAAATTGGTTTACCACCGTGGCAAAGATGGCA
CGACTTACACACTGCGGTTATTACCAGTGGGCGGTTACGTCCGGATGGCGGGTGCTGAAGATGACGAAGAAGAGCTGAAA
CCGGGAACGCCAGTTAGCCTGTACGTGGGCGCTGACGAAAAGGTTGAACGAATCAATACCAGCAAAAAATCCACGTTATT
TAACGGTATTCCGTTAGAAGTTACCGCAACGGATCTAGAGGATGAGTTGTGGATTGAAGGCTATGAAAATGGTGACGAAA
GTGCCATTAAGCGCTATGCGGTTGCTCACGATGCCACGGTGATTGAAAGCGACGGGACGGAGCTACAAATTGCCCCGAAG
GACGTTCAATTTCAGTCGGCATCATTAGGCCGACGATTGATGACGAACTTCGCTGGACCGATGAACAATATCTTATTAGC
GATTGTTACCTTTATGCTGATGTCCTTTGCTCAGGGTGGCGTTTCAATGGGCACGAATCAGGTTCAAGTAGCTGATTCAC
CGGTATCAGTGGCGAAACAGGCTGGCGTGAAGACCAACGATAAGATTACGGCAGTCAACGGTCGAAAGACCACCAGCTGG
ACCGATCTTAGTACCGCGATTCAGCCATTGGCCAACAAAAAAACAACGCTGACGATTCAAAGAGGATCGGCGACCAAACA
CATTACAGTGACACCTAAAGGTGAAACTTCCAACGGTAAAACGGTGGGGATGATTGGGATCACGCAAGCCCAAGATAAGA
GCATTGGGGCCATCTTAGCTTCTGGATTTACACAGACGTGGACGATGACCAAAGCGTTGTTTGGGGCTTTGTGGCACATG
GTTTCTGGTCACTTTAGTTTGAACGATTTAGGCGGACCAGTCGCCATTTTTGCCACAACCTCACAGGCCACCAAGTTTGG
CTTGGTTGGCGTGTTAAATTTCTTAGCCTTTTTATCAATTAATTTGGCAATTGTGAACTTACTGCCGATTCCAGCCTTGG
ATGGTGGTAAAATATTATTAAACTTTATTGAAGCTATTCGGCGTAAGCCGCTTTCAGAAAATGTGGAAGCTGCCGTTACG
TTGATTGGCGTGGGGTTCTTAGTTCTGCTTATGTTACTGGTGACGTGGAATGATATTGAACGCTACTTTATTCATTAA

Domains


Predicted by InterproScan.

(214-261)

(7-410)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB M5AET0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

48.706

100

0.487

  eeP Streptococcus thermophilus LMD-9

48.706

100

0.487


Multiple sequence alignment