Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   AB3Y87_RS06850 Genome accession   NZ_OZ061544
Coordinates   1363592..1364869 (-) Length   425 a.a.
NCBI ID   WP_367294134.1    Uniprot ID   -
Organism   Levilactobacillus brevis isolate Levilactobacillus brevis CIRM-BIA2515     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1358592..1369869
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB3Y87_RS06845 - 1361847..1363556 (-) 1710 WP_011668017.1 proline--tRNA ligase -
  AB3Y87_RS06850 eeP 1363592..1364869 (-) 1278 WP_367294134.1 RIP metalloprotease RseP Regulator
  AB3Y87_RS06855 - 1364965..1365756 (-) 792 WP_011668019.1 phosphatidate cytidylyltransferase -
  AB3Y87_RS06860 - 1365778..1366566 (-) 789 WP_041815361.1 isoprenyl transferase -
  AB3Y87_RS06865 - 1366669..1367091 (-) 423 WP_011668021.1 hypothetical protein -
  AB3Y87_RS06870 frr 1367118..1367681 (-) 564 WP_367294225.1 ribosome recycling factor -
  AB3Y87_RS06875 pyrH 1367678..1368400 (-) 723 WP_011668022.1 UMP kinase -
  AB3Y87_RS06880 tsf 1368547..1369431 (-) 885 WP_011668023.1 translation elongation factor Ts -

Sequence


Protein


Download         Length: 425 a.a.        Molecular weight: 45997.28 Da        Isoelectric Point: 7.2020

>NTDB_id=1166197 AB3Y87_RS06850 WP_367294134.1 1363592..1364869(-) (eeP) [Levilactobacillus brevis isolate Levilactobacillus brevis CIRM-BIA2515]
MITTIITFIIVFGILVIVHEFGHFYFAKRGGILVREFSIGMGPKLVYHRGKDGTTYTLRLLPVGGYVRMAGAEDDEEELK
PGTPVSLYVGADEKVERINTSKKSTLFNGIPLEVTATDLEDELWIEGYENGDESAIKRYAVAHDATVIESDGTELQIAPK
DVQFQSASLGRRLMTNFAGPMNNILLAIVTFMLMSFAQGGVSMGTNQVQVADSPVSVAKQAGVKTNDKITAVNGRKTTSW
TDLSTAIQPLANKKTTLTIQRGSATKHITVTPKGETSNGKTVGMIGITQAQDKSIGAILASGFTQTWTMTKALFGALWHM
VSGHFSLNDLGGPVAIFATTSQATKFGLVGVLNFLAFLSINLAIVNLLPIPALDGGKILLNFIEAIRRKPLSENVEAVVT
LIGVGFLVLLMLLVTWNDIERYFIH

Nucleotide


Download         Length: 1278 bp        

>NTDB_id=1166197 AB3Y87_RS06850 WP_367294134.1 1363592..1364869(-) (eeP) [Levilactobacillus brevis isolate Levilactobacillus brevis CIRM-BIA2515]
GTGATTACAACGATTATTACCTTTATCATTGTCTTTGGGATTTTGGTCATTGTCCATGAATTCGGGCATTTTTACTTTGC
CAAGCGAGGCGGCATTCTCGTCCGTGAATTCTCGATTGGAATGGGGCCAAAATTGGTTTACCACCGTGGCAAAGATGGCA
CGACTTACACACTGCGGTTATTACCAGTGGGCGGTTACGTCCGGATGGCGGGTGCTGAAGATGACGAAGAAGAGCTGAAA
CCGGGAACGCCAGTTAGCCTGTACGTGGGCGCTGACGAAAAGGTTGAACGAATCAATACCAGCAAAAAATCCACGTTATT
TAACGGTATTCCGTTAGAAGTTACCGCAACGGATCTAGAGGATGAGTTGTGGATTGAAGGCTATGAAAATGGTGACGAAA
GTGCCATTAAGCGCTATGCGGTTGCTCACGATGCCACGGTGATTGAAAGCGACGGGACGGAGCTACAAATTGCCCCGAAG
GACGTTCAATTTCAGTCGGCATCATTAGGCCGACGATTGATGACGAACTTCGCTGGACCGATGAACAATATCTTATTAGC
GATTGTTACCTTTATGCTGATGTCCTTTGCTCAGGGTGGCGTTTCAATGGGCACGAATCAGGTTCAAGTAGCTGATTCAC
CGGTATCAGTGGCGAAACAGGCTGGCGTGAAGACCAACGATAAGATTACGGCAGTCAACGGTCGAAAGACCACCAGCTGG
ACCGATCTTAGTACCGCGATTCAGCCATTGGCCAACAAAAAAACAACGCTGACGATTCAAAGAGGATCGGCGACCAAACA
CATTACAGTGACACCTAAAGGTGAAACTTCCAACGGTAAAACGGTGGGGATGATTGGGATCACGCAAGCCCAAGATAAGA
GCATTGGGGCCATCTTAGCTTCTGGATTTACACAGACGTGGACGATGACCAAAGCGTTGTTTGGGGCTTTGTGGCACATG
GTTTCTGGTCACTTTAGTTTGAACGATTTAGGCGGACCAGTCGCCATTTTTGCCACAACCTCACAGGCCACCAAGTTTGG
CTTGGTTGGCGTGTTAAATTTCTTAGCCTTTTTATCAATTAATTTGGCAATTGTGAACTTACTGCCGATTCCAGCCTTGG
ATGGTGGTAAAATATTATTAAACTTTATTGAAGCTATTCGGCGTAAGCCGCTTTCAGAAAATGTGGAAGCTGTCGTTACG
TTGATTGGCGTGGGGTTCTTAGTTCTGCTTATGTTACTGGTGACGTGGAATGATATTGAACGCTACTTTATTCATTAA

Domains


Predicted by InterproScan.

(7-410)

(214-261)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

48.706

100

0.487

  eeP Streptococcus thermophilus LMD-9

48.706

100

0.487


Multiple sequence alignment