Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   AB3Y84_RS09485 Genome accession   NZ_OZ061291
Coordinates   1919130..1919831 (-) Length   233 a.a.
NCBI ID   WP_004255173.1    Uniprot ID   S6FFV7
Organism   Lactococcus lactis isolate Lactococcus lactis CIRM-BIA2553     
Function   degradation of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 1914130..1924831
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB3Y84_RS09465 - 1914240..1915457 (-) 1218 WP_367293953.1 cysteine desulfurase -
  AB3Y84_RS09470 sufD 1915457..1916713 (-) 1257 WP_367293954.1 Fe-S cluster assembly protein SufD -
  AB3Y84_RS09475 sufC 1916851..1917621 (-) 771 WP_004255181.1 Fe-S cluster assembly ATPase SufC -
  AB3Y84_RS09480 - 1917796..1919127 (-) 1332 WP_098384098.1 glycosyltransferase family 4 protein -
  AB3Y84_RS09485 mecA 1919130..1919831 (-) 702 WP_004255173.1 adaptor protein MecA Regulator
  AB3Y84_RS09490 - 1919961..1920695 (-) 735 WP_004255171.1 amino acid ABC transporter ATP-binding protein -
  AB3Y84_RS09495 - 1920695..1921381 (-) 687 WP_004255158.1 amino acid ABC transporter permease -
  AB3Y84_RS09500 - 1921529..1922437 (-) 909 WP_003130548.1 diacylglycerol kinase family protein -

Sequence

Protein


Download         Length: 233 a.a.        Molecular weight: 27077.46 Da        Isoelectric Point: 4.1246

>NTDB_id=1165711 AB3Y84_RS09485 WP_004255173.1 1919130..1919831(-) (mecA) [Lactococcus lactis isolate Lactococcus lactis CIRM-BIA2553]
MKYEDINENTIKITLSFDDLTDYDIKLSDFFGNQEVIEQFFYELVDELGLENRFGNVGMLTFQIQPFPQGVHMIVHEEAM
LGEGGEIPDDPEEFEELMTGFYNKLNEIGADMARERGITDFKPGLGLPGTKKDEAEQEPDFIYYSIRYEDIMSVLTGIKN
VKFADEESEFYRYDGNFYLVVLDNQKEKGKMHVESTRSRMMEYGEATKMSREFLQEYGECLIATRALDVLRKI

Nucleotide


Download         Length: 702 bp        

>NTDB_id=1165711 AB3Y84_RS09485 WP_004255173.1 1919130..1919831(-) (mecA) [Lactococcus lactis isolate Lactococcus lactis CIRM-BIA2553]
ATGAAATATGAGGATATAAACGAAAATACTATAAAAATCACCTTGTCTTTTGATGATTTGACAGATTATGATATCAAATT
ATCAGACTTTTTCGGAAATCAAGAAGTCATTGAACAATTTTTCTATGAATTGGTTGATGAGCTTGGTTTAGAAAATCGCT
TTGGAAATGTGGGAATGTTAACTTTCCAAATCCAACCTTTTCCTCAAGGTGTTCATATGATTGTTCATGAAGAAGCAATG
CTAGGTGAAGGTGGAGAAATTCCAGATGACCCAGAAGAGTTTGAAGAATTGATGACTGGTTTTTATAATAAATTAAATGA
AATAGGGGCAGATATGGCGCGCGAGCGAGGAATTACTGATTTTAAACCTGGGCTTGGTTTACCAGGAACAAAAAAAGACG
AAGCTGAACAAGAGCCAGATTTTATTTATTACTCTATTCGTTATGAAGATATTATGTCTGTCTTAACAGGAATAAAAAAT
GTGAAGTTTGCTGATGAAGAATCAGAGTTTTATCGTTATGATGGCAATTTTTATCTTGTTGTTTTGGATAATCAAAAAGA
AAAAGGCAAGATGCATGTTGAAAGTACCCGTTCACGAATGATGGAATATGGGGAAGCAACAAAAATGAGTCGAGAATTTT
TGCAGGAGTATGGTGAATGTCTTATCGCGACACGTGCTTTAGATGTTCTTAGAAAAATCTAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-230)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB S6FFV7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Lactococcus lactis subsp. lactis strain DGCC12653

99.571

100

0.996
  mecA Lactococcus lactis subsp. cremoris KW2

96.996

100

0.97

Multiple sequence alignment