Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   AB3235_RS08885 Genome accession   NZ_OZ061221
Coordinates   1812977..1814245 (-) Length   422 a.a.
NCBI ID   WP_367378154.1    Uniprot ID   -
Organism   Enterococcus gilvus isolate Enterococcus gilvus CIRM-BIA2700     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1807977..1819245
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB3235_RS08880 - 1808535..1812878 (-) 4344 WP_367378153.1 PolC-type DNA polymerase III -
  AB3235_RS08885 eeP 1812977..1814245 (-) 1269 WP_367378154.1 RIP metalloprotease RseP Regulator
  AB3235_RS08890 - 1814480..1815274 (-) 795 WP_010780364.1 phosphatidate cytidylyltransferase -
  AB3235_RS08895 - 1815350..1816150 (-) 801 WP_044926529.1 isoprenyl transferase -
  AB3235_RS08900 frr 1816345..1816902 (-) 558 WP_086303580.1 ribosome recycling factor -
  AB3235_RS08905 pyrH 1816904..1817626 (-) 723 WP_367378155.1 UMP kinase -
  AB3235_RS08910 tsf 1817756..1818640 (-) 885 WP_010780360.1 translation elongation factor Ts -

Sequence

Protein


Download         Length: 422 a.a.        Molecular weight: 45978.70 Da        Isoelectric Point: 6.3674

>NTDB_id=1165537 AB3235_RS08885 WP_367378154.1 1812977..1814245(-) (eeP) [Enterococcus gilvus isolate Enterococcus gilvus CIRM-BIA2700]
MRTIITFLIVFGVLVIVHEFGHFFFAKRSGILVREFSIGMGPKLIAHMGKGGTTYTLRLLPIGGYVRMAGLEDEETELSP
GMPLSVELTPKNEVKRINVSKKIQLPNSIPMELISADLVDDLTIKGYINGDESRETTYQVQHDATVIEENGTEVRIAPRD
VQFQSAKLGSRILTNFAGPMNNFILTILLFIVLAFLQGGVADYSTNQIGTVQADSPAAVAGVKDHDAIVSVDGKKISSWD
DLTDTVTKKPGKELAVVIEQDGKEKTVQMTPKSVESNGQKVGQIGVSPFMKTGVGDKIVGGFTQSWDLMKRIFGALGSLF
TGFSLDKLGGPVMMYQMSAEASRAGVKTVIYLMALLSVNLGIVNLLPIPAFDGGKILLNIIEGLRGKPLDPDKEGLITMI
GFGFIMLLMILVTWNDIQRFFF

Nucleotide


Download         Length: 1269 bp        

>NTDB_id=1165537 AB3235_RS08885 WP_367378154.1 1812977..1814245(-) (eeP) [Enterococcus gilvus isolate Enterococcus gilvus CIRM-BIA2700]
ATGCGTACGATTATTACATTTTTAATCGTTTTTGGTGTCCTGGTGATCGTTCACGAATTTGGACATTTTTTCTTTGCGAA
ACGTTCAGGTATTTTAGTTCGAGAATTTTCAATCGGTATGGGACCAAAACTGATTGCTCATATGGGAAAAGGCGGGACCA
CTTATACATTGCGTTTATTGCCAATTGGCGGATACGTACGAATGGCTGGACTGGAAGACGAAGAGACCGAATTAAGTCCG
GGTATGCCGTTATCGGTTGAGCTGACACCGAAAAATGAAGTAAAACGAATCAACGTCAGCAAAAAGATCCAATTGCCTAA
CAGCATCCCGATGGAGCTTATTTCAGCCGATTTGGTGGATGATTTGACGATCAAAGGCTACATCAATGGTGATGAAAGCC
GAGAGACTACGTACCAGGTGCAACATGATGCGACAGTCATTGAAGAAAATGGGACAGAAGTTCGGATCGCTCCGAGAGAT
GTTCAATTTCAATCAGCGAAATTGGGCTCGCGTATTTTGACCAATTTTGCAGGACCAATGAATAATTTCATTTTGACGAT
CCTGTTGTTTATTGTACTGGCCTTTTTACAAGGCGGCGTGGCTGACTATAGCACTAACCAAATCGGGACGGTTCAGGCAG
ACAGCCCCGCAGCTGTTGCCGGGGTAAAAGATCACGATGCGATCGTATCTGTGGACGGCAAAAAGATTTCTTCTTGGGAT
GATCTGACAGATACTGTCACGAAAAAACCAGGAAAAGAGTTGGCTGTTGTCATTGAACAAGACGGCAAAGAAAAAACCGT
GCAAATGACACCGAAAAGTGTAGAGAGTAATGGGCAAAAGGTTGGTCAGATCGGTGTGAGCCCCTTCATGAAGACTGGGG
TTGGCGATAAGATTGTTGGCGGATTCACTCAATCTTGGGACTTAATGAAGCGTATTTTTGGCGCTCTAGGCTCACTTTTT
ACTGGCTTTAGTCTGGATAAGCTTGGCGGACCTGTGATGATGTATCAAATGTCAGCAGAAGCGTCACGTGCCGGAGTTAA
AACAGTCATTTACTTAATGGCGCTGCTTTCAGTCAATTTGGGTATCGTCAACTTGCTGCCTATCCCAGCTTTCGATGGTG
GGAAGATCCTCCTGAATATCATTGAGGGACTTCGAGGGAAACCACTCGATCCAGACAAAGAAGGACTGATCACCATGATC
GGCTTTGGGTTTATCATGCTTTTGATGATTTTGGTCACATGGAATGACATTCAACGTTTCTTTTTTTAA

Domains

Predicted by InterproScan.

PDZ domain (PDZ_2)

(208-268)

Peptidase family M50 (Peptidase_M50)

(6-408)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

52.804

100

0.536
  eeP Streptococcus thermophilus LMG 18311

52.57

100

0.533

Multiple sequence alignment