Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   ACE4RH_RS05765 Genome accession   NZ_OZ059824
Coordinates   1143937..1144623 (+) Length   228 a.a.
NCBI ID   WP_001825349.1    Uniprot ID   -
Organism   Staphylococcus aureus isolate E3_22S00626-1     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1138937..1149623
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACE4RH_RS05730 yqeH 1139464..1140564 (+) 1101 WP_001280151.1 ribosome biogenesis GTPase YqeH -
  ACE4RH_RS05735 aroE 1140578..1141384 (+) 807 WP_000666746.1 shikimate dehydrogenase -
  ACE4RH_RS05740 yhbY 1141388..1141678 (+) 291 WP_000955234.1 ribosome assembly RNA-binding protein YhbY -
  ACE4RH_RS05745 nadD 1141681..1142250 (+) 570 WP_000725164.1 nicotinate (nicotinamide) nucleotide adenylyltransferase -
  ACE4RH_RS05750 yqeK 1142240..1142824 (+) 585 WP_001019324.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  ACE4RH_RS05755 rsfS 1142825..1143178 (+) 354 WP_001088020.1 ribosome silencing factor -
  ACE4RH_RS05760 - 1143181..1143897 (+) 717 WP_000084838.1 class I SAM-dependent methyltransferase -
  ACE4RH_RS05765 comEA 1143937..1144623 (+) 687 WP_001825349.1 ComEA family DNA-binding protein Machinery gene
  ACE4RH_RS05770 - 1144715..1145176 (+) 462 WP_000439690.1 ComE operon protein 2 -
  ACE4RH_RS05775 comEC 1145181..1147382 (+) 2202 WP_001807826.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  ACE4RH_RS05780 holA 1147439..1148413 (+) 975 WP_001282570.1 DNA polymerase III subunit delta -
  ACE4RH_RS05785 rpsT 1148458..1148709 (-) 252 WP_001274017.1 30S ribosomal protein S20 -

Sequence

Protein


Download         Length: 228 a.a.        Molecular weight: 25783.41 Da        Isoelectric Point: 9.3305

>NTDB_id=1165380 ACE4RH_RS05765 WP_001825349.1 1143937..1144623(+) (comEA) [Staphylococcus aureus isolate E3_22S00626-1]
MVLLYQFLLRYKDFLTQWKLYIISAVVLIMVLIGFIFWRQDDYTSRDFENKDTALKQSTSENSSLSKLEDVQVKDGDDSK
NKGPVYVDIKGAVKHPNVYKMTSKDRVVDLLDKAQLLDDADVSQINLSEKLTDQKMIFIPHKGQKNVEPQFGANSVHVKN
GNTNNTKVNLNTASVSELMSVPGVGQAKANAIVEYRNQQGAFQEIDDLKKVKGFGSKTFDKLKSYFTT

Nucleotide


Download         Length: 687 bp        

>NTDB_id=1165380 ACE4RH_RS05765 WP_001825349.1 1143937..1144623(+) (comEA) [Staphylococcus aureus isolate E3_22S00626-1]
GTGGTTTTATTGTATCAATTTTTATTACGCTATAAAGATTTTTTAACTCAATGGAAGTTATATATTATAAGTGCTGTTGT
TTTAATTATGGTATTAATTGGTTTTATATTCTGGAGACAAGATGATTATACTTCAAGAGATTTTGAAAATAAAGATACTG
CTCTGAAACAAAGCACTAGTGAAAATAGTAGTTTGTCCAAATTAGAAGATGTCCAGGTCAAAGATGGAGATGATTCCAAA
AATAAAGGTCCTGTATATGTCGATATAAAAGGTGCTGTTAAACATCCTAATGTTTATAAAATGACATCTAAGGATAGAGT
AGTTGATTTACTTGATAAAGCACAATTATTAGATGATGCAGATGTAAGTCAAATTAATTTGTCTGAAAAATTAACAGATC
AAAAAATGATTTTCATTCCTCATAAAGGACAAAAGAATGTTGAACCACAATTTGGAGCAAACAGTGTGCACGTAAAAAAT
GGGAACACAAATAATACTAAAGTAAATTTAAATACGGCATCTGTATCAGAATTGATGTCTGTTCCTGGAGTAGGGCAAGC
TAAAGCTAATGCAATTGTTGAATATCGCAACCAACAAGGTGCATTTCAAGAAATTGACGATTTGAAAAAAGTAAAAGGTT
TTGGAAGTAAAACTTTTGATAAACTGAAATCTTATTTCACGACATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(164-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Staphylococcus aureus MW2

96.476

99.561

0.961
  comEA Staphylococcus aureus N315

96.476

99.561

0.961

Multiple sequence alignment