Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   ACE4RJ_RS11225 Genome accession   NZ_OZ059821
Coordinates   2291003..2291689 (-) Length   228 a.a.
NCBI ID   WP_001825349.1    Uniprot ID   -
Organism   Staphylococcus aureus isolate H3_23S01314-1     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2286003..2296689
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACE4RJ_RS11205 rpsT 2286917..2287168 (+) 252 WP_001274017.1 30S ribosomal protein S20 -
  ACE4RJ_RS11210 holA 2287213..2288187 (-) 975 WP_001282570.1 DNA polymerase III subunit delta -
  ACE4RJ_RS11215 comEC 2288244..2290445 (-) 2202 WP_001807826.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  ACE4RJ_RS11220 - 2290450..2290911 (-) 462 WP_000439690.1 ComE operon protein 2 -
  ACE4RJ_RS11225 comEA 2291003..2291689 (-) 687 WP_001825349.1 ComEA family DNA-binding protein Machinery gene
  ACE4RJ_RS11230 - 2291729..2292445 (-) 717 WP_000084838.1 class I SAM-dependent methyltransferase -
  ACE4RJ_RS11235 rsfS 2292448..2292801 (-) 354 WP_001088020.1 ribosome silencing factor -
  ACE4RJ_RS11240 yqeK 2292802..2293386 (-) 585 WP_001019324.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  ACE4RJ_RS11245 nadD 2293376..2293945 (-) 570 WP_000725164.1 nicotinate (nicotinamide) nucleotide adenylyltransferase -
  ACE4RJ_RS11250 yhbY 2293948..2294238 (-) 291 WP_000955234.1 ribosome assembly RNA-binding protein YhbY -
  ACE4RJ_RS11255 aroE 2294242..2295048 (-) 807 WP_000666746.1 shikimate dehydrogenase -
  ACE4RJ_RS11260 yqeH 2295062..2296162 (-) 1101 WP_001280151.1 ribosome biogenesis GTPase YqeH -

Sequence

Protein


Download         Length: 228 a.a.        Molecular weight: 25783.41 Da        Isoelectric Point: 9.3305

>NTDB_id=1165266 ACE4RJ_RS11225 WP_001825349.1 2291003..2291689(-) (comEA) [Staphylococcus aureus isolate H3_23S01314-1]
MVLLYQFLLRYKDFLTQWKLYIISAVVLIMVLIGFIFWRQDDYTSRDFENKDTALKQSTSENSSLSKLEDVQVKDGDDSK
NKGPVYVDIKGAVKHPNVYKMTSKDRVVDLLDKAQLLDDADVSQINLSEKLTDQKMIFIPHKGQKNVEPQFGANSVHVKN
GNTNNTKVNLNTASVSELMSVPGVGQAKANAIVEYRNQQGAFQEIDDLKKVKGFGSKTFDKLKSYFTT

Nucleotide


Download         Length: 687 bp        

>NTDB_id=1165266 ACE4RJ_RS11225 WP_001825349.1 2291003..2291689(-) (comEA) [Staphylococcus aureus isolate H3_23S01314-1]
GTGGTTTTATTGTATCAATTTTTATTACGCTATAAAGATTTTTTAACTCAATGGAAGTTATATATTATAAGTGCTGTTGT
TTTAATTATGGTATTAATTGGTTTTATATTCTGGAGACAAGATGATTATACTTCAAGAGATTTTGAAAATAAAGATACTG
CTCTGAAACAAAGCACTAGTGAAAATAGTAGTTTGTCCAAATTAGAAGATGTCCAGGTCAAAGATGGAGATGATTCCAAA
AATAAAGGTCCTGTATATGTCGATATAAAAGGTGCTGTTAAACATCCTAATGTTTATAAAATGACATCTAAGGATAGAGT
AGTTGATTTACTTGATAAAGCACAATTATTAGATGATGCAGATGTAAGTCAAATTAATTTGTCTGAAAAATTAACAGATC
AAAAAATGATTTTCATTCCTCATAAAGGACAAAAGAATGTTGAACCACAATTTGGAGCAAACAGTGTGCACGTAAAAAAT
GGGAACACAAATAATACTAAAGTAAATTTAAATACGGCATCTGTATCAGAATTGATGTCTGTTCCTGGAGTAGGGCAAGC
TAAAGCTAATGCAATTGTTGAATATCGCAACCAACAAGGTGCATTTCAAGAAATTGACGATTTGAAAAAAGTAAAAGGTT
TTGGAAGTAAAACTTTTGATAAACTGAAATCTTATTTCACGACATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(164-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Staphylococcus aureus MW2

96.476

99.561

0.961
  comEA Staphylococcus aureus N315

96.476

99.561

0.961

Multiple sequence alignment