Detailed information    

insolico Bioinformatically predicted

Overview

Name   dprA   Type   Machinery gene
Locus tag   ACE4RJ_RS09445 Genome accession   NZ_OZ059821
Coordinates   1899196..1900068 (+) Length   290 a.a.
NCBI ID   WP_374750084.1    Uniprot ID   -
Organism   Staphylococcus aureus isolate H3_23S01314-1     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 1894196..1905068
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACE4RJ_RS09415 - 1894342..1895109 (+) 768 WP_000176395.1 ribonuclease HII -
  ACE4RJ_RS09420 sucC 1895218..1896384 (+) 1167 WP_001020801.1 ADP-forming succinate--CoA ligase subunit beta -
  ACE4RJ_RS09425 sucD 1896406..1897314 (+) 909 WP_031775869.1 succinate--CoA ligase subunit alpha -
  ACE4RJ_RS09430 - 1897541..1897609 (+) 69 WP_374731670.1 YSIRK-type signal peptide-containing protein -
  ACE4RJ_RS09435 - 1897599..1897751 (+) 153 Protein_1856 cell wall hydrolase -
  ACE4RJ_RS09440 fmhC 1897779..1899023 (+) 1245 Protein_1857 FemA/FemB family glycyltransferase FmhC -
  ACE4RJ_RS09445 dprA 1899196..1900068 (+) 873 WP_374750084.1 DNA-processing protein DprA Machinery gene
  ACE4RJ_RS09450 topA 1900242..1902317 (+) 2076 WP_001807811.1 type I DNA topoisomerase -
  ACE4RJ_RS09455 trmFO 1902473..1903780 (+) 1308 WP_000195254.1 methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO -

Sequence

Protein


Download         Length: 290 a.a.        Molecular weight: 33607.03 Da        Isoelectric Point: 9.5142

>NTDB_id=1165253 ACE4RJ_RS09445 WP_374750084.1 1899196..1900068(+) (dprA) [Staphylococcus aureus isolate H3_23S01314-1]
MIRLFLLKLYWAHFSTKQIHQFLMAYPNVIKEEGRKKDSYLCEWVNREENVHLLRKYYAFIKLDHNDIIKELQKLKVSYI
TYMDTEYPVLLKEIYQFPLLLFYKGNIKLINNMHHLAVVGARDSTSYTQQSLEFLLSNDKSKYLTIVSGLAQGADAMAHQ
IALKYNLPTIAVLAFGHQTHYPKSTLALRNKIEEKGLVISEYPPHTPIAKYRFPERNRIISGLSKGVLITEAKEQSGSHI
TIDFALEQNRNVYVLPGSMFNPMTKGNLLRIQEGAKVVLNANDIFEDYYI

Nucleotide


Download         Length: 873 bp        

>NTDB_id=1165253 ACE4RJ_RS09445 WP_374750084.1 1899196..1900068(+) (dprA) [Staphylococcus aureus isolate H3_23S01314-1]
TTGATTAGACTATTTTTGCTTAAGTTATACTGGGCACACTTTTCGACTAAACAAATTCATCAATTTTTAATGGCATATCC
TAATGTAATTAAAGAGGAGGGCAGAAAAAAAGATAGTTATTTATGTGAATGGGTGAATAGGGAAGAAAATGTTCATTTAT
TACGTAAATACTATGCTTTTATAAAACTTGATCATAACGATATTATTAAAGAACTGCAGAAATTAAAAGTAAGTTACATT
ACATATATGGATACTGAATACCCAGTGCTATTAAAAGAAATATATCAATTTCCATTACTTCTTTTCTATAAAGGGAACAT
CAAATTAATAAATAATATGCATCATTTGGCTGTAGTAGGTGCAAGAGATTCTACAAGTTATACCCAACAGTCTTTAGAAT
TTTTATTATCAAATGATAAAAGCAAATATTTAACAATTGTTTCCGGCCTTGCTCAAGGAGCTGATGCAATGGCACATCAA
ATAGCTTTAAAATACAATCTCCCTACAATAGCAGTTTTAGCCTTTGGCCATCAAACACATTATCCCAAAAGTACATTAGC
ATTAAGAAATAAAATAGAAGAAAAAGGTTTAGTTATATCCGAATATCCACCACATACACCAATTGCTAAATATAGATTTC
CTGAGCGCAATAGAATTATCAGCGGTTTGTCAAAAGGGGTTTTAATTACTGAGGCTAAGGAACAAAGTGGCAGTCACATC
ACGATAGATTTTGCATTAGAGCAAAATAGAAATGTTTATGTTTTACCTGGATCTATGTTTAATCCTATGACAAAAGGTAA
TTTATTACGTATCCAAGAAGGTGCTAAGGTAGTATTAAACGCTAATGATATATTTGAAGACTACTATATTTAA

Domains

Predicted by InterproScan.

DNA recombination-mediator protein A (DNA_processg_A)

(72-279)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Staphylococcus aureus MW2

99.31

100

0.993
  dprA Staphylococcus aureus N315

98.966

100

0.99

Multiple sequence alignment