Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   ACE4RI_RS09810 Genome accession   NZ_OZ059820
Coordinates   1967098..1967784 (+) Length   228 a.a.
NCBI ID   WP_001825349.1    Uniprot ID   -
Organism   Staphylococcus aureus isolate E1_22S00622-1     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1962098..1972784
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACE4RI_RS09775 yqeH 1962625..1963725 (+) 1101 WP_001280151.1 ribosome biogenesis GTPase YqeH -
  ACE4RI_RS09780 aroE 1963739..1964545 (+) 807 WP_000666746.1 shikimate dehydrogenase -
  ACE4RI_RS09785 yhbY 1964549..1964839 (+) 291 WP_000955234.1 ribosome assembly RNA-binding protein YhbY -
  ACE4RI_RS09790 nadD 1964842..1965411 (+) 570 WP_000725164.1 nicotinate (nicotinamide) nucleotide adenylyltransferase -
  ACE4RI_RS09795 yqeK 1965401..1965985 (+) 585 WP_001019324.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  ACE4RI_RS09800 rsfS 1965986..1966339 (+) 354 WP_001088020.1 ribosome silencing factor -
  ACE4RI_RS09805 - 1966342..1967058 (+) 717 WP_000084838.1 class I SAM-dependent methyltransferase -
  ACE4RI_RS09810 comEA 1967098..1967784 (+) 687 WP_001825349.1 ComEA family DNA-binding protein Machinery gene
  ACE4RI_RS09815 - 1967876..1968337 (+) 462 WP_000439690.1 ComE operon protein 2 -
  ACE4RI_RS09820 comEC 1968342..1970543 (+) 2202 WP_001807826.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  ACE4RI_RS09825 holA 1970600..1971574 (+) 975 WP_001282570.1 DNA polymerase III subunit delta -
  ACE4RI_RS09830 rpsT 1971619..1971870 (-) 252 WP_001274017.1 30S ribosomal protein S20 -

Sequence

Protein


Download         Length: 228 a.a.        Molecular weight: 25783.41 Da        Isoelectric Point: 9.3305

>NTDB_id=1165215 ACE4RI_RS09810 WP_001825349.1 1967098..1967784(+) (comEA) [Staphylococcus aureus isolate E1_22S00622-1]
MVLLYQFLLRYKDFLTQWKLYIISAVVLIMVLIGFIFWRQDDYTSRDFENKDTALKQSTSENSSLSKLEDVQVKDGDDSK
NKGPVYVDIKGAVKHPNVYKMTSKDRVVDLLDKAQLLDDADVSQINLSEKLTDQKMIFIPHKGQKNVEPQFGANSVHVKN
GNTNNTKVNLNTASVSELMSVPGVGQAKANAIVEYRNQQGAFQEIDDLKKVKGFGSKTFDKLKSYFTT

Nucleotide


Download         Length: 687 bp        

>NTDB_id=1165215 ACE4RI_RS09810 WP_001825349.1 1967098..1967784(+) (comEA) [Staphylococcus aureus isolate E1_22S00622-1]
GTGGTTTTATTGTATCAATTTTTATTACGCTATAAAGATTTTTTAACTCAATGGAAGTTATATATTATAAGTGCTGTTGT
TTTAATTATGGTATTAATTGGTTTTATATTCTGGAGACAAGATGATTATACTTCAAGAGATTTTGAAAATAAAGATACTG
CTCTGAAACAAAGCACTAGTGAAAATAGTAGTTTGTCCAAATTAGAAGATGTCCAGGTCAAAGATGGAGATGATTCCAAA
AATAAAGGTCCTGTATATGTCGATATAAAAGGTGCTGTTAAACATCCTAATGTTTATAAAATGACATCTAAGGATAGAGT
AGTTGATTTACTTGATAAAGCACAATTATTAGATGATGCAGATGTAAGTCAAATTAATTTGTCTGAAAAATTAACAGATC
AAAAAATGATTTTCATTCCTCATAAAGGACAAAAGAATGTTGAACCACAATTTGGAGCAAACAGTGTGCACGTAAAAAAT
GGGAACACAAATAATACTAAAGTAAATTTAAATACGGCATCTGTATCAGAATTGATGTCTGTTCCTGGAGTAGGGCAAGC
TAAAGCTAATGCAATTGTTGAATATCGCAACCAACAAGGTGCATTTCAAGAAATTGACGATTTGAAAAAAGTAAAAGGTT
TTGGAAGTAAAACTTTTGATAAACTGAAATCTTATTTCACGACATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(164-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Staphylococcus aureus MW2

96.476

99.561

0.961
  comEA Staphylococcus aureus N315

96.476

99.561

0.961

Multiple sequence alignment