Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   ACE4RG_RS08375 Genome accession   NZ_OZ059819
Coordinates   1678093..1678779 (+) Length   228 a.a.
NCBI ID   WP_001825349.1    Uniprot ID   -
Organism   Staphylococcus aureus isolate H2_22S00635-1     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1673093..1683779
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACE4RG_RS08340 yqeH 1673620..1674720 (+) 1101 WP_001280151.1 ribosome biogenesis GTPase YqeH -
  ACE4RG_RS08345 aroE 1674734..1675540 (+) 807 WP_000666746.1 shikimate dehydrogenase -
  ACE4RG_RS08350 yhbY 1675544..1675834 (+) 291 WP_000955234.1 ribosome assembly RNA-binding protein YhbY -
  ACE4RG_RS08355 nadD 1675837..1676406 (+) 570 WP_000725164.1 nicotinate (nicotinamide) nucleotide adenylyltransferase -
  ACE4RG_RS08360 yqeK 1676396..1676980 (+) 585 WP_001019324.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  ACE4RG_RS08365 rsfS 1676981..1677334 (+) 354 WP_001088020.1 ribosome silencing factor -
  ACE4RG_RS08370 - 1677337..1678053 (+) 717 WP_000084838.1 class I SAM-dependent methyltransferase -
  ACE4RG_RS08375 comEA 1678093..1678779 (+) 687 WP_001825349.1 ComEA family DNA-binding protein Machinery gene
  ACE4RG_RS08380 - 1678871..1679332 (+) 462 WP_000439690.1 ComE operon protein 2 -
  ACE4RG_RS08385 comEC 1679337..1681538 (+) 2202 WP_001807826.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  ACE4RG_RS08390 holA 1681595..1682569 (+) 975 WP_001282570.1 DNA polymerase III subunit delta -
  ACE4RG_RS08395 rpsT 1682614..1682865 (-) 252 WP_001274017.1 30S ribosomal protein S20 -

Sequence

Protein


Download         Length: 228 a.a.        Molecular weight: 25783.41 Da        Isoelectric Point: 9.3305

>NTDB_id=1165166 ACE4RG_RS08375 WP_001825349.1 1678093..1678779(+) (comEA) [Staphylococcus aureus isolate H2_22S00635-1]
MVLLYQFLLRYKDFLTQWKLYIISAVVLIMVLIGFIFWRQDDYTSRDFENKDTALKQSTSENSSLSKLEDVQVKDGDDSK
NKGPVYVDIKGAVKHPNVYKMTSKDRVVDLLDKAQLLDDADVSQINLSEKLTDQKMIFIPHKGQKNVEPQFGANSVHVKN
GNTNNTKVNLNTASVSELMSVPGVGQAKANAIVEYRNQQGAFQEIDDLKKVKGFGSKTFDKLKSYFTT

Nucleotide


Download         Length: 687 bp        

>NTDB_id=1165166 ACE4RG_RS08375 WP_001825349.1 1678093..1678779(+) (comEA) [Staphylococcus aureus isolate H2_22S00635-1]
GTGGTTTTATTGTATCAATTTTTATTACGCTATAAAGATTTTTTAACTCAATGGAAGTTATATATTATAAGTGCTGTTGT
TTTAATTATGGTATTAATTGGTTTTATATTCTGGAGACAAGATGATTATACTTCAAGAGATTTTGAAAATAAAGATACTG
CTCTGAAACAAAGCACTAGTGAAAATAGTAGTTTGTCCAAATTAGAAGATGTCCAGGTCAAAGATGGAGATGATTCCAAA
AATAAAGGTCCTGTATATGTCGATATAAAAGGTGCTGTTAAACATCCTAATGTTTATAAAATGACATCTAAGGATAGAGT
AGTTGATTTACTTGATAAAGCACAATTATTAGATGATGCAGATGTAAGTCAAATTAATTTGTCTGAAAAATTAACAGATC
AAAAAATGATTTTCATTCCTCATAAAGGACAAAAGAATGTTGAACCACAATTTGGAGCAAACAGTGTGCACGTAAAAAAT
GGGAACACAAATAATACTAAAGTAAATTTAAATACGGCATCTGTATCAGAATTGATGTCTGTTCCTGGAGTAGGGCAAGC
TAAAGCTAATGCAATTGTTGAATATCGCAACCAACAAGGTGCATTTCAAGAAATTGACGATTTGAAAAAAGTAAAAGGTT
TTGGAAGTAAAACTTTTGATAAACTGAAATCTTATTTCACGACATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(164-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Staphylococcus aureus MW2

96.476

99.561

0.961
  comEA Staphylococcus aureus N315

96.476

99.561

0.961

Multiple sequence alignment