Detailed information    

insolico Bioinformatically predicted

Overview


Name   comK/comK1   Type   Regulator
Locus tag   ACE4RB_RS01680 Genome accession   NZ_OZ059818
Coordinates   285669..286238 (-) Length   189 a.a.
NCBI ID   WP_000287260.1    Uniprot ID   -
Organism   Staphylococcus aureus isolate E4_22S00627-1     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 280669..291238
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACE4RB_RS01660 - 282174..283532 (+) 1359 WP_000021872.1 TrkH family potassium uptake protein -
  ACE4RB_RS01665 - 283671..285182 (+) 1512 WP_000414168.1 bifunctional UDP-sugar hydrolase/5'-nucleotidase -
  ACE4RB_RS01680 comK/comK1 285669..286238 (-) 570 WP_000287260.1 competence protein ComK Regulator
  ACE4RB_RS01685 - 286448..286666 (+) 219 WP_000876826.1 IDEAL domain-containing protein -
  ACE4RB_RS01690 - 286747..287733 (-) 987 WP_000668814.1 lipoate--protein ligase -
  ACE4RB_RS01695 - 287932..288108 (+) 177 WP_000214898.1 YkvS family protein -
  ACE4RB_RS01700 - 288123..288725 (+) 603 WP_001033867.1 type II CAAX prenyl endopeptidase Rce1 family protein -
  ACE4RB_RS01705 - 289041..289103 (+) 63 WP_240785570.1 putative holin-like toxin -
  ACE4RB_RS01710 - 289738..290022 (+) 285 WP_000790905.1 lactococcin 972 family bacteriocin -

Sequence


Protein


Download         Length: 189 a.a.        Molecular weight: 22624.86 Da        Isoelectric Point: 9.6092

>NTDB_id=1165112 ACE4RB_RS01680 WP_000287260.1 285669..286238(-) (comK/comK1) [Staphylococcus aureus isolate E4_22S00627-1]
MYSQNIYVIRKGDMVIRPAFDDDDQRHGSEIIRFDKTRIQNPFKVQKIIERSCKFYGNTYLGKKAETNRITGISSKPPIL
LTPLFPTYFFPTHSDRQNENIWLNMHYIESIKELKNRKCKVTFINNESIILHVSYHSLWHQYNNSIFYYYMVDKQSRMIS
KNPDQPIDYNKATLNVFEALTRYSLFEDK

Nucleotide


Download         Length: 570 bp        

>NTDB_id=1165112 ACE4RB_RS01680 WP_000287260.1 285669..286238(-) (comK/comK1) [Staphylococcus aureus isolate E4_22S00627-1]
ATGTATTCTCAAAATATTTATGTGATACGCAAAGGAGACATGGTTATTCGACCAGCATTTGATGATGACGATCAAAGACA
TGGTAGTGAAATAATTCGGTTTGACAAAACGCGTATTCAAAATCCTTTTAAAGTCCAGAAAATCATTGAACGCTCTTGCA
AATTTTATGGTAATACTTATCTTGGCAAGAAAGCAGAGACAAACCGCATTACTGGCATTTCTAGTAAACCACCTATTTTA
CTAACACCATTATTTCCAACTTATTTTTTCCCAACACATTCTGACAGACAAAATGAAAATATTTGGTTAAATATGCATTA
TATCGAAAGTATCAAAGAATTAAAAAATCGTAAATGTAAAGTGACATTTATTAATAATGAATCAATCATTCTTCATGTTT
CATACCACAGTTTATGGCATCAATATAACAATTCCATTTTTTACTATTACATGGTAGATAAACAATCTCGCATGATATCA
AAAAATCCCGACCAACCAATAGATTATAATAAAGCCACATTGAATGTGTTTGAAGCATTGACACGCTATTCTTTATTTGA
AGATAAATAA

Domains


Predicted by InterproScan.

(5-156)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comK/comK1 Staphylococcus aureus MW2

99.471

100

0.995

  comK/comK1 Staphylococcus aureus N315

99.471

100

0.995


Multiple sequence alignment