Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   ACE4RC_RS14580 Genome accession   NZ_OZ059816
Coordinates   2881185..2881871 (+) Length   228 a.a.
NCBI ID   WP_001825349.1    Uniprot ID   -
Organism   Staphylococcus aureus isolate H2_22S00625-1     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2876185..2886871
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACE4RC_RS14545 yqeH 2876712..2877812 (+) 1101 WP_001280151.1 ribosome biogenesis GTPase YqeH -
  ACE4RC_RS14550 aroE 2877826..2878632 (+) 807 WP_000666746.1 shikimate dehydrogenase -
  ACE4RC_RS14555 yhbY 2878636..2878926 (+) 291 WP_000955234.1 ribosome assembly RNA-binding protein YhbY -
  ACE4RC_RS14560 nadD 2878929..2879498 (+) 570 WP_000725164.1 nicotinate (nicotinamide) nucleotide adenylyltransferase -
  ACE4RC_RS14565 yqeK 2879488..2880072 (+) 585 WP_001019324.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  ACE4RC_RS14570 rsfS 2880073..2880426 (+) 354 WP_001088020.1 ribosome silencing factor -
  ACE4RC_RS14575 - 2880429..2881145 (+) 717 WP_000084838.1 class I SAM-dependent methyltransferase -
  ACE4RC_RS14580 comEA 2881185..2881871 (+) 687 WP_001825349.1 ComEA family DNA-binding protein Machinery gene
  ACE4RC_RS14585 - 2881963..2882424 (+) 462 WP_000439690.1 ComE operon protein 2 -
  ACE4RC_RS14590 comEC 2882429..2884630 (+) 2202 WP_001807826.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  ACE4RC_RS14595 holA 2884687..2885661 (+) 975 WP_001282570.1 DNA polymerase III subunit delta -
  ACE4RC_RS14600 rpsT 2885706..2885957 (-) 252 WP_001274017.1 30S ribosomal protein S20 -

Sequence

Protein


Download         Length: 228 a.a.        Molecular weight: 25783.41 Da        Isoelectric Point: 9.3305

>NTDB_id=1165053 ACE4RC_RS14580 WP_001825349.1 2881185..2881871(+) (comEA) [Staphylococcus aureus isolate H2_22S00625-1]
MVLLYQFLLRYKDFLTQWKLYIISAVVLIMVLIGFIFWRQDDYTSRDFENKDTALKQSTSENSSLSKLEDVQVKDGDDSK
NKGPVYVDIKGAVKHPNVYKMTSKDRVVDLLDKAQLLDDADVSQINLSEKLTDQKMIFIPHKGQKNVEPQFGANSVHVKN
GNTNNTKVNLNTASVSELMSVPGVGQAKANAIVEYRNQQGAFQEIDDLKKVKGFGSKTFDKLKSYFTT

Nucleotide


Download         Length: 687 bp        

>NTDB_id=1165053 ACE4RC_RS14580 WP_001825349.1 2881185..2881871(+) (comEA) [Staphylococcus aureus isolate H2_22S00625-1]
GTGGTTTTATTGTATCAATTTTTATTACGCTATAAAGATTTTTTAACTCAATGGAAGTTATATATTATAAGTGCTGTTGT
TTTAATTATGGTATTAATTGGTTTTATATTCTGGAGACAAGATGATTATACTTCAAGAGATTTTGAAAATAAAGATACTG
CTCTGAAACAAAGCACTAGTGAAAATAGTAGTTTGTCCAAATTAGAAGATGTCCAGGTCAAAGATGGAGATGATTCCAAA
AATAAAGGTCCTGTATATGTCGATATAAAAGGTGCTGTTAAACATCCTAATGTTTATAAAATGACATCTAAGGATAGAGT
AGTTGATTTACTTGATAAAGCACAATTATTAGATGATGCAGATGTAAGTCAAATTAATTTGTCTGAAAAATTAACAGATC
AAAAAATGATTTTCATTCCTCATAAAGGACAAAAGAATGTTGAACCACAATTTGGAGCAAACAGTGTGCACGTAAAAAAT
GGGAACACAAATAATACTAAAGTAAATTTAAATACGGCATCTGTATCAGAATTGATGTCTGTTCCTGGAGTAGGGCAAGC
TAAAGCTAATGCAATTGTTGAATATCGCAACCAACAAGGTGCATTTCAAGAAATTGACGATTTGAAAAAAGTAAAAGGTT
TTGGAAGTAAAACTTTTGATAAACTGAAATCTTATTTCACGACATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(164-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Staphylococcus aureus MW2

96.476

99.561

0.961
  comEA Staphylococcus aureus N315

96.476

99.561

0.961

Multiple sequence alignment