Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrC   Type   Regulator
Locus tag   BSU_RS02165 Genome accession   NZ_OZ024942
Coordinates   429963..430085 (+) Length   40 a.a.
NCBI ID   WP_003224994.1    Uniprot ID   G4NQY6
Organism   Bacillus subtilis subsp. subtilis str. 168     
Function   antagonize RapC (predicted from homology)   
Competence regulation

Genomic Context

Location: 424963..435085
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSU_RS02150 (BSU03750) yclJ 426577..427260 (+) 684 WP_003246532.1 two-component system response regulator YclJ -
  BSU_RS02155 (BSU03760) yclK 427247..428668 (+) 1422 WP_009969263.1 two-component system sensor histidine kinase YclK -
  BSU_RS02160 (BSU03770) rapC 428831..429979 (+) 1149 WP_003246686.1 response regulator aspartate phosphatase RapC Regulator
  BSU_RS02165 (BSU03780) phrC 429963..430085 (+) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  BSU_RS02170 (BSU03788) yczM 430185..430274 (-) 90 WP_015482794.1 YjcZ family sporulation protein -
  BSU_RS02175 (BSU03789) yczN 430356..430469 (-) 114 WP_003234495.1 YjcZ family sporulation protein -
  BSU_RS02180 (BSU03790) thrD 430623..431987 (-) 1365 WP_009966541.1 aspartate kinase -
  BSU_RS02185 (BSU03800) ceuB 432372..433322 (+) 951 WP_003234491.1 petrobactin ABC transporter permease YclN Machinery gene
  BSU_RS02190 (BSU03810) yclO 433315..434262 (+) 948 WP_003246705.1 petrobactin ABC transporter permease YclO -
  BSU_RS02195 (BSU03820) yclP 434256..435014 (+) 759 WP_003234487.1 petrobactin ABC transporter ATP-binding protein YclP -

Sequence

Protein


Download         Length: 40 a.a.        Molecular weight: 4197.98 Da        Isoelectric Point: 8.0285

>NTDB_id=1163035 BSU_RS02165 WP_003224994.1 429963..430085(+) (phrC) [Bacillus subtilis subsp. subtilis str. 168]
MKLKSKLFVICLAAAAIFTAAGVSANAEALDFHVTERGMT

Nucleotide


Download         Length: 123 bp        

>NTDB_id=1163035 BSU_RS02165 WP_003224994.1 429963..430085(+) (phrC) [Bacillus subtilis subsp. subtilis str. 168]
ATGAAATTGAAATCTAAGTTGTTTGTTATTTGTTTGGCCGCAGCCGCGATTTTTACAGCGGCTGGCGTTTCTGCTAATGC
GGAAGCACTCGACTTTCATGTGACAGAAAGAGGAATGACGTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-40)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NQY6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrC Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment