Detailed information NTG1163034

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: BSU_RS02160
• Genome accession: NZ_OZ024942
• Coordinates: 428831..429979 (+)
• Length: 382 a.a.
• NCBI ID: WP_003246686.1
• Uniprot ID: A0AAE2V9H5
• Organism: Bacillus subtilis subsp. subtilis str. 168
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 423831..434979

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BSU_RS02140 (BSU03730)	yclH	424208..424888 (-)	681	WP_003234507.1	ABC transporter ATP-binding protein	-
BSU_RS02145 (BSU03740)	yclI	424904..426364 (-)	1461	WP_003234506.1	ABC transporter permease	-
BSU_RS02150 (BSU03750)	yclJ	426577..427260 (+)	684	WP_003246532.1	two-component system response regulator YclJ	-
BSU_RS02155 (BSU03760)	yclK	427247..428668 (+)	1422	WP_009969263.1	two-component system sensor histidine kinase YclK	-
BSU_RS02160 (BSU03770)	rapC	428831..429979 (+)	1149	WP_003246686.1	response regulator aspartate phosphatase RapC	Regulator
BSU_RS02165 (BSU03780)	phrC	429963..430085 (+)	123	WP_003224994.1	phosphatase RapC inhibitor PhrC	Regulator
BSU_RS02170 (BSU03788)	yczM	430185..430274 (-)	90	WP_015482794.1	YjcZ family sporulation protein	-
BSU_RS02175 (BSU03789)	yczN	430356..430469 (-)	114	WP_003234495.1	YjcZ family sporulation protein	-
BSU_RS02180 (BSU03790)	thrD	430623..431987 (-)	1365	WP_009966541.1	aspartate kinase	-
BSU_RS02185 (BSU03800)	ceuB	432372..433322 (+)	951	WP_003234491.1	petrobactin ABC transporter permease YclN	Machinery gene
BSU_RS02190 (BSU03810)	yclO	433315..434262 (+)	948	WP_003246705.1	petrobactin ABC transporter permease YclO	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45634.68 Da
• Isoelectric Point: 4.9618

>NTDB_id=1163034 BSU_RS02160 WP_003246686.1 428831..429979(+) (rapC) [Bacillus subtilis subsp. subtilis str. 168]
MKSGVIPSSAVGQKINEWYRYIRTFSVPDAEVLKAEIQQELKHMQHDSNLLLYYSLMEFRHQLMLDYLEPLEKLNIEDQP
SLSELSRNIDSNQADLKGLLDYYVNFFRGMYEFDKREFISAITYYKQAEKKLSFVADHIERAEFYFKIAEAYYYMKQTYF
SLINIKNAYEIYVEQETYNVRIIQCHFVFGVNLMDERNFEQAARHFKLALNMAQAEQKAQLVGRAYYNLGLCYYNQDLLD
PAIDYFEKAVSTFESSRIVNSLPQAYFLITLIYYKQGKHDKASEYHKRGYEYAKETDDADYAVKFEFLQSLYLDQPNEEG
IERCFQYLKNKNMYADIEDLALEVAKYYYEQKWFKLSASYFLQVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=1163034 BSU_RS02160 WP_003246686.1 428831..429979(+) (rapC) [Bacillus subtilis subsp. subtilis str. 168]
ATGAAGAGTGGGGTAATTCCTTCTTCAGCGGTCGGTCAAAAAATTAACGAGTGGTACAGATATATCCGGACATTCAGCGT
GCCGGATGCCGAAGTGTTAAAAGCTGAAATCCAGCAGGAACTGAAACACATGCAGCATGATTCCAACTTGCTGCTTTATT
ATTCACTAATGGAATTCCGGCACCAGCTTATGCTGGATTATCTTGAGCCGTTAGAGAAATTAAATATCGAAGACCAGCCA
AGCCTGTCTGAATTATCAAGAAACATTGACAGCAACCAGGCAGATCTCAAAGGGCTGCTCGACTATTACGTGAATTTTTT
TCGCGGGATGTATGAATTTGATAAGCGGGAATTTATTTCTGCCATTACATACTATAAACAGGCGGAGAAAAAGCTCTCCT
TTGTCGCAGACCATATTGAACGGGCTGAATTCTATTTTAAAATCGCGGAAGCTTATTATTATATGAAGCAAACGTATTTT
TCATTGATTAATATAAAAAACGCCTATGAAATTTACGTGGAGCAGGAAACCTATAATGTGAGAATCATTCAGTGCCATTT
CGTCTTCGGGGTCAACCTGATGGATGAAAGAAATTTCGAACAAGCCGCACGCCATTTCAAATTGGCGCTCAACATGGCCC
AAGCAGAACAAAAAGCCCAGCTGGTTGGAAGAGCATACTACAATCTCGGGTTATGCTATTACAATCAAGACCTTCTAGAC
CCTGCCATTGATTACTTTGAAAAAGCGGTCTCCACATTTGAAAGCAGCAGGATCGTCAATTCTCTCCCGCAAGCCTATTT
TTTAATCACCCTGATTTATTATAAACAGGGAAAACATGATAAAGCTTCGGAATATCACAAGCGGGGCTATGAATATGCTA
AAGAAACAGACGATGCAGACTATGCCGTAAAATTCGAGTTTTTGCAATCCCTATATCTGGATCAGCCCAATGAAGAAGGA
ATCGAACGATGTTTCCAGTACTTAAAAAATAAAAATATGTACGCTGATATAGAGGATTTAGCCCTAGAAGTAGCAAAATA
TTACTATGAACAGAAATGGTTTAAACTGTCTGCTTCCTACTTTCTACAAGTTGAAGAGGCAAGAAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	100	100	1
rapF	Bacillus subtilis subsp. subtilis str. 168	57.368	99.476	0.571