Detailed information    

insolico Bioinformatically predicted

Overview

Name   dsbA1   Type   Machinery gene
Locus tag   ABNR90_RS04865 Genome accession   NZ_OZ021673
Coordinates   939326..939970 (-) Length   214 a.a.
NCBI ID   WP_003689466.1    Uniprot ID   Q5F6K3
Organism   Neisseria gonorrhoeae isolate SGC-23-002     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 934326..944970
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABNR90_RS04830 ftsL 934807..935070 (-) 264 WP_003701583.1 cell division protein FtsL -
  ABNR90_RS04835 rsmH 935097..936053 (-) 957 WP_003689462.1 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH -
  ABNR90_RS04840 mraZ 936050..936505 (-) 456 WP_149032473.1 division/cell wall cluster transcriptional repressor MraZ -
  ABNR90_RS04845 - 936784..938031 (+) 1248 WP_010951292.1 class I SAM-dependent methyltransferase -
  ABNR90_RS04860 - 938472..939293 (-) 822 WP_003689465.1 undecaprenyl-diphosphate phosphatase -
  ABNR90_RS04865 dsbA1 939326..939970 (-) 645 WP_003689466.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  ABNR90_RS04870 ftsN 939973..940836 (-) 864 WP_010360712.1 cell division protein FtsN -
  ABNR90_RS04875 comM 940942..942438 (-) 1497 WP_048339516.1 YifB family Mg chelatase-like AAA ATPase Machinery gene
  ABNR90_RS04880 - 942452..942772 (-) 321 WP_002216505.1 accessory factor UbiK family protein -
  ABNR90_RS04885 putP 943260..944786 (+) 1527 WP_003689473.1 sodium/proline symporter PutP -

Sequence

Protein


Download         Length: 214 a.a.        Molecular weight: 24003.07 Da        Isoelectric Point: 9.9225

>NTDB_id=1162862 ABNR90_RS04865 WP_003689466.1 939326..939970(-) (dsbA1) [Neisseria gonorrhoeae isolate SGC-23-002]
MKFKHLLPLLLSAVLSAQAYALTEGEDYLVLDKPIPQEQPGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPSDTYLRTEH
VVWRPEMLGLARMAAAVKLSGLKYQANSAVFKAVYEQKIRLENRAVAGKWALSQKGFDGKKLMRAYDSPEAAAVALKMQK
LTEQYGIDSTPTVIVGGKYRVIFNNGFDGGVHTIKELVAKVREERKRQTPAVQK

Nucleotide


Download         Length: 645 bp        

>NTDB_id=1162862 ABNR90_RS04865 WP_003689466.1 939326..939970(-) (dsbA1) [Neisseria gonorrhoeae isolate SGC-23-002]
ATGAAGTTTAAACATCTGTTGCCGCTGCTGCTGTCGGCAGTGTTGTCCGCGCAGGCATATGCCCTGACGGAAGGGGAAGA
CTATCTTGTGTTGGATAAACCCATTCCTCAAGAACAGCCGGGAAAAATTGAGGTTTTGGAATTTTTCGGCTATTTTTGCG
TACATTGCCATCATTTCGATCCTTTGTTATTGAAACTGGGCAAGGCATTGCCGTCTGATACTTATCTGCGGACGGAGCAC
GTGGTCTGGCGGCCTGAAATGCTCGGTCTGGCAAGAATGGCTGCTGCGGTCAAGCTGTCGGGTTTGAAATATCAGGCAAA
CTCTGCTGTGTTTAAAGCAGTTTACGAACAAAAAATCCGTTTGGAAAACAGGGCTGTTGCCGGAAAATGGGCTTTATCTC
AAAAAGGTTTTGACGGCAAAAAACTGATGCGCGCCTATGATTCCCCCGAAGCTGCCGCCGTCGCATTAAAAATGCAGAAA
CTGACGGAACAATACGGTATTGACAGCACGCCGACCGTTATTGTCGGCGGAAAATACCGCGTTATCTTCAATAATGGCTT
TGATGGCGGCGTTCATACGATTAAAGAATTGGTTGCCAAAGTCAGGGAAGAACGCAAGCGTCAGACCCCTGCTGTACAGA
AATAG

Domains

Predicted by InterproScan.

Thioredoxin (Thioredoxin_4)

(42-179)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q5F6K3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA1 Neisseria meningitidis MC58

57.219

87.383

0.5
  dsbA2 Neisseria meningitidis MC58

52.688

86.916

0.458

Multiple sequence alignment