Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | ACHEXA_RS12495 | Genome accession | NZ_OZ020628 |
| Coordinates | 2378116..2378568 (-) | Length | 150 a.a. |
| NCBI ID | WP_049686128.1 | Uniprot ID | A0A097AUQ6 |
| Organism | Thermoanaerobacter kivui strain LKT-1 substr. G1 isolate G1_S005 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2373116..2383568
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACHEXA_RS12470 (TKVG1_12450) | rplI | 2374106..2374549 (-) | 444 | WP_049686123.1 | 50S ribosomal protein L9 | - |
| ACHEXA_RS12475 (TKVG1_12455) | - | 2374546..2376513 (-) | 1968 | WP_049686124.1 | DHH family phosphoesterase | - |
| ACHEXA_RS12480 (TKVG1_12460) | - | 2376532..2377440 (-) | 909 | WP_049686125.1 | YybS family protein | - |
| ACHEXA_RS12485 (TKVG1_12465) | - | 2377445..2377753 (-) | 309 | WP_049686126.1 | MazG-like family protein | - |
| ACHEXA_RS12490 (TKVG1_12470) | rpsR | 2377834..2378100 (-) | 267 | WP_049686127.1 | 30S ribosomal protein S18 | - |
| ACHEXA_RS12495 (TKVG1_12475) | ssbA | 2378116..2378568 (-) | 453 | WP_049686128.1 | single-stranded DNA-binding protein | Machinery gene |
| ACHEXA_RS12500 (TKVG1_12480) | rpsF | 2378600..2378887 (-) | 288 | WP_049686129.1 | 30S ribosomal protein S6 | - |
| ACHEXA_RS12505 (TKVG1_12485) | - | 2378954..2379160 (-) | 207 | WP_049686130.1 | DUF951 domain-containing protein | - |
| ACHEXA_RS12510 (TKVG1_12490) | mscS | 2379240..2380091 (-) | 852 | WP_049686131.1 | small-conductance mechanosensitive channel MscS | - |
| ACHEXA_RS12515 (TKVG1_12495) | yyaC | 2380244..2380801 (+) | 558 | WP_049686132.1 | spore protease YyaC | - |
Sequence
Protein
Download Length: 150 a.a. Molecular weight: 16935.92 Da Isoelectric Point: 4.3472
>NTDB_id=1162845 ACHEXA_RS12495 WP_049686128.1 2378116..2378568(-) (ssbA) [Thermoanaerobacter kivui strain LKT-1 substr. G1 isolate G1_S005]
MLNKVILIGRLTKDPVMRYSANMVPVTTFTLAVNRNYVSQSGERPTDFIPIVTWRKLAEICANNLKKGRLIAVTGSIQTR
SWDDNSGNRHWVTEVVADDVRFLEPKSGFGSSGNAEENRDFDEGFDSVFEDIPEEFEGFTPIESEDDLPF
MLNKVILIGRLTKDPVMRYSANMVPVTTFTLAVNRNYVSQSGERPTDFIPIVTWRKLAEICANNLKKGRLIAVTGSIQTR
SWDDNSGNRHWVTEVVADDVRFLEPKSGFGSSGNAEENRDFDEGFDSVFEDIPEEFEGFTPIESEDDLPF
Nucleotide
Download Length: 453 bp
>NTDB_id=1162845 ACHEXA_RS12495 WP_049686128.1 2378116..2378568(-) (ssbA) [Thermoanaerobacter kivui strain LKT-1 substr. G1 isolate G1_S005]
ATGTTAAATAAGGTTATTTTAATAGGCCGGCTTACAAAAGACCCTGTAATGAGGTATAGTGCCAATATGGTTCCTGTTAC
TACTTTTACGTTAGCGGTTAACAGGAATTATGTCAGTCAGAGCGGGGAAAGGCCTACTGATTTTATACCCATCGTCACAT
GGAGAAAGCTTGCAGAGATCTGCGCTAATAACTTAAAAAAGGGTAGACTAATAGCAGTGACGGGAAGCATTCAAACCCGT
TCATGGGATGATAATAGCGGCAATCGGCATTGGGTTACAGAAGTGGTAGCAGACGATGTGAGATTTTTAGAGCCGAAATC
TGGTTTTGGCAGCAGTGGCAATGCTGAAGAAAATAGAGATTTTGATGAAGGCTTTGACAGTGTATTTGAAGATATACCGG
AAGAGTTTGAGGGCTTTACACCTATAGAGAGTGAAGATGATTTACCTTTTTAA
ATGTTAAATAAGGTTATTTTAATAGGCCGGCTTACAAAAGACCCTGTAATGAGGTATAGTGCCAATATGGTTCCTGTTAC
TACTTTTACGTTAGCGGTTAACAGGAATTATGTCAGTCAGAGCGGGGAAAGGCCTACTGATTTTATACCCATCGTCACAT
GGAGAAAGCTTGCAGAGATCTGCGCTAATAACTTAAAAAAGGGTAGACTAATAGCAGTGACGGGAAGCATTCAAACCCGT
TCATGGGATGATAATAGCGGCAATCGGCATTGGGTTACAGAAGTGGTAGCAGACGATGTGAGATTTTTAGAGCCGAAATC
TGGTTTTGGCAGCAGTGGCAATGCTGAAGAAAATAGAGATTTTGATGAAGGCTTTGACAGTGTATTTGAAGATATACCGG
AAGAGTTTGAGGGCTTTACACCTATAGAGAGTGAAGATGATTTACCTTTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
46.286 |
100 |
0.54 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
44 |
83.333 |
0.367 |