Detailed information
Bioinformatically predicted
Overview
| Name | luxP | Type | Regulator |
| Locus tag | U9J37_RS20645 | Genome accession | NZ_OY808998 |
| Coordinates | 1433028..1434125 (+) | Length | 365 a.a. |
| NCBI ID | WP_005473126.1 | Uniprot ID | - |
| Organism | Vibrio sp. 16 isolate VDT1 | ||
| Function | autoinducer sensor (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1428028..1439125
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| U9J37_RS20610 (VDT1_4197) | - | 1428639..1429256 (+) | 618 | WP_038190593.1 | OmpA family protein | - |
| U9J37_RS20615 (VDT1_4198) | - | 1429318..1429569 (-) | 252 | WP_038136740.1 | YgjV family protein | - |
| U9J37_RS20620 (VDT1_4199) | - | 1429871..1430191 (-) | 321 | WP_038136743.1 | DUF496 family protein | - |
| U9J37_RS20625 (VDT1_4200) | - | 1430383..1430577 (+) | 195 | WP_322414271.1 | hypothetical protein | - |
| U9J37_RS20630 (VDT1_4201) | - | 1430611..1431270 (+) | 660 | WP_322414116.1 | YceH family protein | - |
| U9J37_RS20635 (VDT1_4202) | - | 1431271..1431582 (+) | 312 | WP_043887091.1 | GIY-YIG nuclease family protein | - |
| U9J37_RS20640 (VDT1_4203) | - | 1431652..1432812 (+) | 1161 | WP_005473244.1 | conjugal transfer protein TraF | - |
| U9J37_RS20645 (VDT1_4204) | luxP | 1433028..1434125 (+) | 1098 | WP_005473126.1 | autoinducer 2-binding periplasmic protein LuxP | Regulator |
| U9J37_RS20650 (VDT1_4205) | luxQ | 1434125..1436677 (+) | 2553 | WP_005473223.1 | quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ | Regulator |
| U9J37_RS20655 (VDT1_4206) | - | 1436674..1437339 (-) | 666 | WP_043887093.1 | PilZ domain-containing protein | - |
| U9J37_RS20660 (VDT1_4207) | - | 1437484..1438743 (-) | 1260 | WP_005473213.1 | hydroxymethylglutaryl-CoA reductase | - |
| U9J37_RS20665 (VDT1_4208) | - | 1438826..1439113 (-) | 288 | WP_005473289.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 365 a.a. Molecular weight: 41396.60 Da Isoelectric Point: 5.8424
>NTDB_id=1162008 U9J37_RS20645 WP_005473126.1 1433028..1434125(+) (luxP) [Vibrio sp. 16 isolate VDT1]
MYKASLFSLLALASAVSQAHTTQVLNGYWQYDSYLEQHPAQKQLTDALSDAVRDYPVPVSLTQSKPISISVVYPGQQVSD
YWSRNIKAFETRLEKLGIRYSINQVFTRPNVDVRQQSLSLLEAIQNNTDYLIFTLDTTRHRKFIEHVMSSTDTKLILQNI
TTPVRAWDNHQPFLYVGFDHLHGARLLEEYYKSTVKKDSRYSVLYFSEGYVSYARGDTFIEEMSHHDSYKLSSSFYTEAT
RESGYKTALQALSSDKDLSFIYACSTDVALGAADALKELNRTDILLNGWGGGTAELDAIAKGELDVTVMRMNDDTGIAMA
EAIKWDIEGKQVPVVYSGDFELVTKQDSPIKIEKLKQRAFRYSDL
MYKASLFSLLALASAVSQAHTTQVLNGYWQYDSYLEQHPAQKQLTDALSDAVRDYPVPVSLTQSKPISISVVYPGQQVSD
YWSRNIKAFETRLEKLGIRYSINQVFTRPNVDVRQQSLSLLEAIQNNTDYLIFTLDTTRHRKFIEHVMSSTDTKLILQNI
TTPVRAWDNHQPFLYVGFDHLHGARLLEEYYKSTVKKDSRYSVLYFSEGYVSYARGDTFIEEMSHHDSYKLSSSFYTEAT
RESGYKTALQALSSDKDLSFIYACSTDVALGAADALKELNRTDILLNGWGGGTAELDAIAKGELDVTVMRMNDDTGIAMA
EAIKWDIEGKQVPVVYSGDFELVTKQDSPIKIEKLKQRAFRYSDL
Nucleotide
Download Length: 1098 bp
>NTDB_id=1162008 U9J37_RS20645 WP_005473126.1 1433028..1434125(+) (luxP) [Vibrio sp. 16 isolate VDT1]
ATGTATAAAGCCTCACTATTCTCTTTGTTGGCACTCGCGTCGGCAGTATCACAAGCGCATACCACTCAAGTTCTCAATGG
TTATTGGCAATACGATAGCTACTTGGAACAGCATCCAGCACAAAAGCAGCTGACGGATGCGTTGTCCGATGCGGTCAGAG
ATTATCCCGTCCCTGTAAGTTTAACTCAGAGCAAACCAATTTCGATCTCTGTCGTCTATCCTGGGCAGCAGGTCTCGGAC
TATTGGAGCCGCAACATTAAAGCGTTCGAGACTCGCCTTGAGAAGCTCGGTATTCGCTACAGCATTAATCAGGTGTTCAC
TCGCCCAAATGTTGATGTTAGGCAGCAAAGCCTTTCGCTTTTAGAGGCCATACAAAATAATACGGATTATTTAATTTTCA
CGCTTGATACGACGCGCCATCGCAAGTTCATTGAGCACGTGATGAGTTCGACGGACACAAAGCTCATCTTGCAGAACATC
ACCACGCCAGTTCGCGCATGGGACAATCATCAACCCTTTTTATACGTTGGATTCGATCACCTCCATGGCGCAAGGTTGTT
AGAGGAGTATTACAAGTCAACGGTTAAGAAAGATAGCCGCTACTCGGTGCTCTATTTCTCTGAAGGCTATGTGAGCTATG
CTCGGGGTGATACGTTTATCGAAGAGATGAGCCACCATGACAGCTACAAACTTTCGTCCTCTTTTTACACTGAGGCGACA
AGGGAGTCTGGTTATAAAACAGCGCTTCAAGCGCTAAGCAGTGATAAGGACCTAAGTTTTATTTACGCTTGTTCTACCGA
TGTGGCTTTAGGAGCGGCAGATGCGCTTAAAGAACTAAACCGCACTGACATATTGTTGAATGGTTGGGGTGGGGGAACGG
CAGAACTCGATGCGATTGCCAAGGGTGAGCTCGATGTGACCGTTATGCGCATGAATGATGATACCGGCATTGCAATGGCA
GAAGCGATCAAGTGGGACATTGAGGGTAAACAAGTGCCAGTGGTTTACTCGGGTGATTTTGAGTTGGTAACCAAGCAAGA
TAGCCCAATCAAAATTGAAAAATTAAAGCAACGTGCATTCAGGTACTCTGATCTTTAA
ATGTATAAAGCCTCACTATTCTCTTTGTTGGCACTCGCGTCGGCAGTATCACAAGCGCATACCACTCAAGTTCTCAATGG
TTATTGGCAATACGATAGCTACTTGGAACAGCATCCAGCACAAAAGCAGCTGACGGATGCGTTGTCCGATGCGGTCAGAG
ATTATCCCGTCCCTGTAAGTTTAACTCAGAGCAAACCAATTTCGATCTCTGTCGTCTATCCTGGGCAGCAGGTCTCGGAC
TATTGGAGCCGCAACATTAAAGCGTTCGAGACTCGCCTTGAGAAGCTCGGTATTCGCTACAGCATTAATCAGGTGTTCAC
TCGCCCAAATGTTGATGTTAGGCAGCAAAGCCTTTCGCTTTTAGAGGCCATACAAAATAATACGGATTATTTAATTTTCA
CGCTTGATACGACGCGCCATCGCAAGTTCATTGAGCACGTGATGAGTTCGACGGACACAAAGCTCATCTTGCAGAACATC
ACCACGCCAGTTCGCGCATGGGACAATCATCAACCCTTTTTATACGTTGGATTCGATCACCTCCATGGCGCAAGGTTGTT
AGAGGAGTATTACAAGTCAACGGTTAAGAAAGATAGCCGCTACTCGGTGCTCTATTTCTCTGAAGGCTATGTGAGCTATG
CTCGGGGTGATACGTTTATCGAAGAGATGAGCCACCATGACAGCTACAAACTTTCGTCCTCTTTTTACACTGAGGCGACA
AGGGAGTCTGGTTATAAAACAGCGCTTCAAGCGCTAAGCAGTGATAAGGACCTAAGTTTTATTTACGCTTGTTCTACCGA
TGTGGCTTTAGGAGCGGCAGATGCGCTTAAAGAACTAAACCGCACTGACATATTGTTGAATGGTTGGGGTGGGGGAACGG
CAGAACTCGATGCGATTGCCAAGGGTGAGCTCGATGTGACCGTTATGCGCATGAATGATGATACCGGCATTGCAATGGCA
GAAGCGATCAAGTGGGACATTGAGGGTAAACAAGTGCCAGTGGTTTACTCGGGTGATTTTGAGTTGGTAACCAAGCAAGA
TAGCCCAATCAAAATTGAAAAATTAAAGCAACGTGCATTCAGGTACTCTGATCTTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| luxP | Vibrio cholerae strain A1552 |
63.989 |
98.904 |
0.633 |