Detailed information NTG1162009

Bioinformatically predicted

Overview

• Name: luxQ
• Type: Regulator
• Locus tag: U9J37_RS20650
• Genome accession: NZ_OY808998
• Coordinates: 1434125..1436677 (+)
• Length: 850 a.a.
• NCBI ID: WP_005473223.1
• Uniprot ID: -
• Organism: Vibrio sp. 16 isolate VDT1
• Function: autoinducer sensor (predicted from homology) Competence regulation

Genomic Context

Location: 1429125..1441677

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
U9J37_RS20615 (VDT1_4198)	-	1429318..1429569 (-)	252	WP_038136740.1	YgjV family protein	-
U9J37_RS20620 (VDT1_4199)	-	1429871..1430191 (-)	321	WP_038136743.1	DUF496 family protein	-
U9J37_RS20625 (VDT1_4200)	-	1430383..1430577 (+)	195	WP_322414271.1	hypothetical protein	-
U9J37_RS20630 (VDT1_4201)	-	1430611..1431270 (+)	660	WP_322414116.1	YceH family protein	-
U9J37_RS20635 (VDT1_4202)	-	1431271..1431582 (+)	312	WP_043887091.1	GIY-YIG nuclease family protein	-
U9J37_RS20640 (VDT1_4203)	-	1431652..1432812 (+)	1161	WP_005473244.1	conjugal transfer protein TraF	-
U9J37_RS20645 (VDT1_4204)	luxP	1433028..1434125 (+)	1098	WP_005473126.1	autoinducer 2-binding periplasmic protein LuxP	Regulator
U9J37_RS20650 (VDT1_4205)	luxQ	1434125..1436677 (+)	2553	WP_005473223.1	quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ	Regulator
U9J37_RS20655 (VDT1_4206)	-	1436674..1437339 (-)	666	WP_043887093.1	PilZ domain-containing protein	-
U9J37_RS20660 (VDT1_4207)	-	1437484..1438743 (-)	1260	WP_005473213.1	hydroxymethylglutaryl-CoA reductase	-
U9J37_RS20665 (VDT1_4208)	-	1438826..1439113 (-)	288	WP_005473289.1	hypothetical protein	-
U9J37_RS20670 (VDT1_4209)	-	1439168..1439329 (-)	162	WP_005473120.1	hypothetical protein	-
U9J37_RS20675 (VDT1_4210)	yccS	1439512..1441608 (-)	2097	WP_322414117.1	YccS family putative transporter	-

Sequence

Protein

• Length: 850 a.a.
• Molecular weight: 95488.15 Da
• Isoelectric Point: 4.8109

>NTDB_id=1162009 U9J37_RS20650 WP_005473223.1 1434125..1436677(+) (luxQ) [Vibrio sp. 16 isolate VDT1]
MMKIFKRGRRYQLATLLTNSIFLTIGVLTLVMVLQNFQVNREVVAQEVARTKTQTQSLVQEIFNFRLKALEIQQDSYSRS
VSLINGVVSRDQMAIDRFFTSIDQILPNLAPDIRFLASGEGVFWDDGNAEFYGISPFQLQHLNTDVVTGNSWHISQTPSS
MGMRYLMMRRSPVVNLTNGEVVAHLYIGVVLNNNFSLVNAITKGSNADELILAVGSQVIASSKKIDDFRYVALLEESSEA
LNTSSYMVSRTDLTIAGVPTFLSVYTVQGNNHIEHFVKSQYLWMLFTGVMIAFIAISTRLWLGKRVSLELKKLMDFIEST
FTEQKTHQFDGSGIEEFNQIGQRFELSFKRLNEQEKQFADLFNFSLSPITLWSTDDGQLLRYNPAAERCFKDEVSRERLV
EALSHHVKMCAQGATLTGVNTTIGGITYRWNLSPIISDNATKQIMAQGQDITSFVEAEKQSQAAKEEAEESARVRADFLA
KMSHELRTPLNGILGVSQLLKHSLNEQEALEHVDVLCNSGEHLLAVLNDILDFSKIEQGKFNIETNEFRLIELETTVEKI
FMPLCVEKGIELSMRSDIESQMWANSDQVRLNQILFNLVSNAIKFTHQGQVCVELSSIETEQQFELEIVVKDTGIGIEEP
QLKTIFEPFIQAEATTTREYGGSGLGLAIVHSLVELMNGTISIDSVVGKGTTLVARIPMDMYIGERNVEPNSLLVEPQAL
FDESLHVLLVEDNHTNAFIAKAFCEKYGMSVTWVQDGHNAIDYLRDDPNVALVLMDNQLPSLGGIESTRIIREELGLNVP
IFACTADGMQDTKRAFIASGADYVIVKPIKELALNKAMIYFKEKFIDIER

Nucleotide

• Length: 2553 bp

>NTDB_id=1162009 U9J37_RS20650 WP_005473223.1 1434125..1436677(+) (luxQ) [Vibrio sp. 16 isolate VDT1]
ATGATGAAGATATTTAAGCGTGGACGGCGTTATCAGCTCGCCACGCTTCTTACTAACTCAATATTTCTGACCATAGGTGT
GTTGACCTTGGTCATGGTGCTACAAAACTTCCAAGTAAACCGAGAAGTTGTCGCGCAGGAAGTCGCGCGTACAAAAACTC
AGACCCAAAGCCTCGTCCAAGAAATCTTCAACTTCCGCCTGAAAGCTCTAGAGATACAGCAAGACAGCTACTCACGAAGC
GTCTCTTTAATAAATGGCGTCGTCAGCCGAGACCAGATGGCGATAGACCGATTCTTCACCAGTATTGATCAGATTCTGCC
TAATTTAGCGCCCGACATCCGATTTCTGGCCAGTGGTGAAGGGGTGTTTTGGGATGACGGCAATGCAGAATTTTACGGGA
TTTCTCCTTTTCAACTTCAGCACTTGAATACTGATGTTGTCACGGGAAATTCTTGGCATATTTCACAAACCCCATCAAGC
ATGGGAATGCGATATTTGATGATGCGCCGCTCCCCAGTGGTGAACCTAACCAATGGTGAGGTGGTCGCGCATCTTTATAT
TGGTGTTGTCCTGAACAACAATTTCTCGCTGGTCAATGCGATCACCAAAGGAAGTAATGCGGATGAGCTTATTCTTGCGG
TAGGATCTCAAGTGATCGCATCAAGTAAGAAAATTGATGATTTCCGTTATGTTGCCCTACTTGAAGAGTCTTCTGAAGCG
CTCAATACCAGCAGCTACATGGTGTCGCGAACCGACCTGACCATTGCTGGTGTACCTACCTTCTTATCGGTCTATACCGT
TCAAGGCAACAATCACATCGAACATTTTGTAAAAAGCCAATACTTGTGGATGTTGTTTACAGGCGTCATGATTGCTTTCA
TTGCGATATCGACACGCCTATGGCTTGGGAAAAGAGTCTCGCTTGAACTGAAGAAGTTGATGGACTTCATCGAATCGACG
TTTACTGAACAGAAAACACATCAGTTTGATGGCTCGGGTATCGAAGAGTTTAACCAAATCGGTCAACGCTTTGAACTTTC
ATTTAAACGACTCAACGAGCAAGAAAAACAGTTTGCCGATCTATTTAATTTCTCCCTTTCACCTATCACCTTGTGGAGCA
CCGACGATGGTCAGTTGCTGCGGTATAACCCAGCGGCAGAACGTTGCTTTAAAGACGAAGTCTCACGAGAGCGTTTAGTT
GAGGCATTGTCTCATCACGTCAAAATGTGTGCTCAAGGTGCGACCCTAACAGGTGTGAACACTACCATTGGCGGTATCAC
TTATCGCTGGAATCTTTCACCGATCATTAGTGACAATGCCACCAAGCAAATCATGGCTCAGGGGCAAGACATTACGAGTT
TTGTCGAAGCGGAAAAGCAGAGCCAAGCAGCCAAAGAAGAAGCGGAAGAGTCAGCGCGAGTGCGTGCGGATTTCTTAGCG
AAAATGAGCCATGAGTTACGCACCCCTTTGAATGGAATTCTAGGTGTTTCGCAACTACTCAAACACAGCTTGAACGAACA
AGAAGCATTGGAGCACGTTGACGTGCTGTGTAACAGTGGTGAGCATCTGCTTGCTGTTCTTAATGATATTCTCGATTTCT
CTAAAATCGAGCAGGGCAAGTTCAACATAGAAACCAATGAGTTTCGCTTGATCGAGCTTGAAACCACCGTCGAGAAAATA
TTCATGCCGCTGTGCGTTGAAAAAGGAATAGAACTCTCTATGCGCAGTGATATCGAATCACAGATGTGGGCCAACAGTGA
CCAAGTTCGCTTGAACCAGATTCTGTTTAATCTTGTGAGCAATGCCATCAAGTTCACCCATCAAGGTCAGGTTTGTGTTG
AATTGTCGAGCATCGAAACAGAGCAGCAGTTTGAGCTTGAAATTGTGGTGAAAGATACAGGAATTGGTATTGAAGAGCCG
CAGCTTAAAACCATTTTCGAACCCTTTATTCAAGCGGAAGCAACCACGACACGCGAGTATGGCGGAAGTGGCTTGGGGCT
GGCAATTGTTCATAGTTTGGTTGAGCTTATGAACGGTACCATCTCCATTGACAGTGTTGTGGGGAAAGGGACGACACTTG
TGGCGCGAATCCCGATGGATATGTACATCGGGGAGCGCAATGTCGAGCCAAACAGCTTACTTGTTGAGCCTCAGGCGTTG
TTTGATGAGTCGTTGCACGTTTTGTTAGTCGAAGACAACCACACCAATGCCTTTATCGCGAAGGCATTTTGCGAAAAGTA
TGGCATGAGCGTTACTTGGGTCCAAGATGGTCATAACGCCATCGACTATCTGCGCGATGATCCAAACGTCGCATTGGTAT
TGATGGACAATCAGCTTCCTAGCTTAGGTGGCATTGAATCGACTCGAATTATTCGAGAAGAACTTGGGCTGAATGTGCCC
ATTTTCGCGTGTACCGCAGACGGTATGCAAGATACCAAGCGAGCGTTTATCGCCAGTGGTGCCGATTACGTGATTGTTAA
ACCAATCAAAGAGTTAGCCCTGAACAAAGCGATGATTTATTTTAAAGAGAAGTTTATCGACATCGAGCGTTAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (587-699)

• Response regulator receiver domain (Response_reg) (727-837)

• LuxQ, periplasmic (LuxQ-periplasm) (42-274)

• His Kinase A (phospho-acceptor) domain (HisKA) (475-539)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxQ	Vibrio cholerae strain A1552	49.167	98.824	0.486