Detailed information NTG1162005

Bioinformatically predicted

Overview

• Name: cqsS
• Type: Regulator
• Locus tag: U9J37_RS14600
• Genome accession: NZ_OY808998
• Coordinates: 81593..83662 (-)
• Length: 689 a.a.
• NCBI ID: WP_005471184.1
• Uniprot ID: -
• Organism: Vibrio sp. 16 isolate VDT1
• Function: autoinducer sensor (predicted from homology) Competence regulation

Genomic Context

Location: 76593..88662

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
U9J37_RS14585 (VDT1_2972)	clcA	77609..79009 (+)	1401	WP_005471274.1	H(+)/Cl(-) exchange transporter ClcA	-
U9J37_RS14590 (VDT1_2973)	-	79122..80096 (+)	975	WP_043886801.1	TDT family transporter	-
U9J37_RS14595 (VDT1_2974)	cqsA	80380..81561 (+)	1182	WP_005471312.1	alpha-hydroxyketone-type quorum-sensing autoinducer synthase	Regulator
U9J37_RS14600 (VDT1_2975)	cqsS	81593..83662 (-)	2070	WP_005471184.1	hybrid sensor histidine kinase/response regulator	Regulator
U9J37_RS14605 (VDT1_2976)	-	83778..86819 (-)	3042	WP_005471288.1	AAA family ATPase	-
U9J37_RS14610 (VDT1_2977)	-	86827..87957 (-)	1131	WP_005471359.1	exonuclease SbcCD subunit D	-

Sequence

Protein

• Length: 689 a.a.
• Molecular weight: 78277.66 Da
• Isoelectric Point: 5.0660

>NTDB_id=1162005 U9J37_RS14600 WP_005471184.1 81593..83662(-) (cqsS) [Vibrio sp. 16 isolate VDT1]
MDAFRVAIQDTVNKIYQYAEPNLTLVGWMGLLGFPTYYYVWSYLFPQPYESLALRTFCSLLFAVIAFRNQLPEHYRRYMP
YYYLVAITLCLPFFFFYMMLKNDWSTIWAMSFMSSIFLHILLVHQTRIVLAQAGVSIFIAIVLVYGADMNQALNDVVWPY
IPIFLFTYVFGNLFYFRNQAEHESKVSIAKSFGAGIAHEMRNPLSALKASIEVLSSILPADKSGSQSGISISTHELSMAR
EVLDDADEVIRNGNEAIDLLLTSIDENRVSTSTFRKHSIATVTRHALESFPYKSGHDKSAVELVVEQDFDFFGSDTLIKY
ALYNLLKNAFYYQADNDFKIVITLTRRDDKNRMIFHDNGVGIAPDVIEHVFKDFYTFGKTGSYGLGLPFCHKVMVAVGGM
IECDSILDEWTQFTLTFPEYKSNAVGSIKLDLMKSKSILLIGEQGTFSNILNEHAFYQGFRFVTLGLEAASKKQEYEFEF
DVIFIDFDIALKTPSLMNELEAKLHFTEGRIAPLFQSDHSYHDNIERHLAIYPVEKERFREDPDSVLDQLLFEQLEPSRS
VIPKKRVCHGKTIVIADDNQSLRAYTSILLEQQGFEVIQAQNGHEVIEKLQQSPVDLVIMDIEMPSLNGLEAANAIRNSA
SEYANVPILGHTGDSTALAIDKIQQAGMNDYVIKPAGTDVLLDKIANWI

Nucleotide

• Length: 2070 bp

>NTDB_id=1162005 U9J37_RS14600 WP_005471184.1 81593..83662(-) (cqsS) [Vibrio sp. 16 isolate VDT1]
ATGGACGCATTTCGCGTAGCAATCCAAGACACGGTCAACAAAATATACCAGTACGCAGAACCTAACCTTACCTTAGTCGG
TTGGATGGGGCTGCTAGGGTTTCCTACATACTACTACGTATGGAGCTATCTATTTCCGCAACCATACGAAAGTTTGGCAT
TAAGAACGTTTTGTTCTTTGCTGTTCGCCGTTATTGCGTTTCGTAATCAGTTGCCTGAGCACTATCGGCGCTATATGCCG
TATTACTACCTTGTTGCCATCACGCTCTGTTTACCGTTTTTTTTCTTCTACATGATGCTGAAAAACGACTGGTCAACAAT
CTGGGCGATGTCATTTATGTCGTCCATTTTCCTGCATATTTTACTCGTGCATCAAACGCGGATTGTGTTGGCTCAAGCGG
GCGTGTCTATTTTCATCGCTATTGTGCTTGTTTATGGTGCCGATATGAATCAGGCGCTGAACGATGTGGTGTGGCCATAT
ATCCCTATTTTCCTGTTTACCTATGTGTTCGGTAATTTGTTCTATTTTCGAAACCAAGCCGAGCACGAAAGCAAGGTGTC
GATTGCCAAATCATTTGGCGCTGGCATTGCCCATGAAATGCGCAACCCGTTAAGTGCGCTTAAGGCATCGATTGAAGTGC
TGAGTTCCATTTTACCAGCGGATAAGAGTGGCTCTCAAAGTGGCATCAGTATATCAACGCACGAACTGTCGATGGCCAGA
GAGGTTCTTGATGACGCTGATGAAGTGATTCGCAACGGCAATGAAGCTATCGATCTGCTGTTAACATCGATTGATGAGAA
TCGAGTGTCGACGTCTACCTTTAGGAAACACTCCATTGCTACGGTCACGCGACACGCGCTTGAGAGCTTCCCTTACAAAA
GCGGCCATGACAAATCTGCGGTGGAGCTGGTTGTCGAGCAAGATTTCGACTTCTTCGGTAGTGATACCTTAATCAAATAC
GCACTCTACAACCTGCTCAAAAATGCGTTTTACTACCAAGCCGACAATGATTTTAAAATTGTAATTACGCTCACCCGCCG
TGATGATAAAAATCGGATGATTTTCCATGATAACGGTGTCGGTATTGCTCCCGATGTTATCGAGCACGTTTTCAAGGATT
TTTATACCTTTGGTAAGACAGGCAGCTATGGGCTTGGCCTGCCTTTCTGTCACAAAGTTATGGTGGCGGTTGGTGGAATG
ATTGAGTGTGATTCGATACTGGATGAATGGACGCAATTCACACTCACGTTCCCAGAATATAAATCTAATGCGGTAGGGTC
GATCAAACTCGATCTGATGAAGTCAAAATCCATCCTGCTGATTGGCGAACAAGGAACCTTTAGTAACATTTTAAATGAAC
ACGCGTTTTACCAAGGGTTTCGATTTGTCACTTTGGGCCTTGAGGCGGCGAGTAAAAAACAAGAATATGAATTCGAATTT
GATGTCATTTTTATCGATTTCGACATTGCGCTCAAAACGCCAAGCTTAATGAATGAACTTGAAGCAAAACTGCACTTTAC
CGAAGGTCGCATCGCACCTTTATTCCAAAGTGATCACTCGTATCACGACAATATTGAACGTCACCTGGCCATCTATCCAG
TTGAGAAAGAGCGCTTTAGGGAAGATCCCGATAGCGTGCTTGATCAGCTTCTGTTTGAACAGCTCGAACCGAGCCGCAGT
GTTATTCCAAAGAAACGTGTTTGCCACGGGAAAACCATCGTTATTGCGGACGACAATCAATCTCTACGTGCTTACACGTC
GATTTTGTTGGAGCAGCAAGGGTTTGAAGTTATCCAAGCTCAAAATGGTCATGAGGTGATCGAAAAGCTTCAACAAAGCC
CTGTAGACTTGGTGATTATGGACATCGAAATGCCGTCTCTTAATGGATTAGAGGCGGCCAATGCAATACGAAATTCAGCC
AGTGAGTATGCCAATGTCCCAATTCTTGGTCACACGGGAGACTCAACGGCGCTTGCCATCGATAAAATTCAACAAGCGGG
CATGAATGACTATGTCATCAAACCCGCGGGCACCGATGTTCTGCTCGACAAGATTGCCAACTGGATTTAG

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (573-685)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (318-419)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cqsS	Vibrio cholerae strain A1552	52.346	98.984	0.518