Detailed information NTG1161605

Bioinformatically predicted

Overview

• Name: pilL-C
• Type: Machinery gene
• Locus tag: SLP02_RS20125
• Genome accession: NZ_OY762512
• Coordinates: 4122180..4125551 (-)
• Length: 1123 a.a.
• NCBI ID: WP_319422500.1
• Uniprot ID: -
• Organism: Pleurocapsa sp. FMAR1 isolate 44838
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4117180..4130551

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SLP02_RS20110	ftsH3	4117320..4119170 (+)	1851	WP_319422497.1	ATP-dependent zinc metalloprotease FtsH3	-
SLP02_RS20115	-	4119287..4120114 (+)	828	WP_319422498.1	ChaN family lipoprotein	-
SLP02_RS20120	-	4120118..4121758 (-)	1641	WP_319422499.1	SpoIID/LytB domain-containing protein	-
SLP02_RS20125	pilL-C	4122180..4125551 (-)	3372	WP_319422500.1	response regulator	Machinery gene
SLP02_RS20130	purU	4125945..4126799 (+)	855	WP_319422501.1	formyltetrahydrofolate deformylase	-
SLP02_RS20135	-	4126848..4127279 (+)	432	WP_319422502.1	DUF29 family protein	-
SLP02_RS20140	-	4127286..4128221 (-)	936	WP_319422503.1	formylglycine-generating enzyme family protein	-
SLP02_RS20145	-	4128308..4128967 (+)	660	WP_319422504.1	cupin	-
SLP02_RS20150	pgeF	4129003..4129803 (-)	801	WP_319422505.1	peptidoglycan editing factor PgeF	-

Sequence

Protein

• Length: 1123 a.a.
• Molecular weight: 124499.52 Da
• Isoelectric Point: 4.1647

>NTDB_id=1161605 SLP02_RS20125 WP_319422500.1 4122180..4125551(-) (pilL-C) [Pleurocapsa sp. FMAR1 isolate 44838]
MSSQDKSLETNDNLNEPSKASEGSADLWTEDDDSEIVTEFISAETLDSEESSTAETDQTKKKVLSDADFDNWDFRDPLLA
EDGNTLESNLVLDNSPEQIKSSPEVDELITNDSQQIDLVEADLQENIAKETDLNSSADIEFDDLESLTEALLNLEDSEDI
QLDDLSEFESLTAKYAQENNLEEIDLNILDKLDDSALDLDSAKDLQLDSLELNDFEGLSDLNSLTAEGLDNDLDGILDLE
TEIESLDSLVLESTSETIENSLDSDLELSSLDSLLGDEVDSLLEVVPAAFERPKVSPAPVTVKVSNEVADLSPVNQAQSF
DQTMRVSVKKLDDLNNLIGELVVKRNRLEDDQERLRRFLDNLLGHVQSLGDAGAKMHDMYERSLLEGALIASRQSRANSA
VAAGGSGFGSTREAQAEGLDALEMDRFNGFHLVSQDIIELIVRVREAASDIQFVVDETDKVAQTFRQVTGQLQDGMNSSR
MVAFEQTTDRLPRAIRDISRKQKKQTQLYVEGKDVLIDKMIVEHLYNPMTHLVNNAISHGIEKPEERLKKGKPEVGNINI
RAFIQGNQTVITVRDDGAGIDLEIVKQKAVEKNLITWATAQNLTEQQVYELLFHPGFSTKDQADDFAGRGVGMDVVNTDL
KKIRGSVSTESEVGKGTTFTIRLPLVLSICKALTCVDDNTKIAFPIDGVEDTKEYLPSDITTNANGLRCITWKNTLLPLR
PLKTLLNYNRKIRRAGIYNANQNNDDTISVIILRSLDNLLAVEVDEVKAEQEIVIKQIDGAIPKPPGIAGATVLGDGTIM
PIGDVLELIEIAQGKRTIEIGFDVLAGEAARKQFQAESIQQEPMVLVVDDSITVRELLSMSFNKLGYRVEQARDGQEAWD
KLRGGLVCDMIFSDIEMPRMNGLELLSNLHKDQSLRSIPVAMLTSRGADKHRQIANDLGAKAYLTKPYTEKDLMDVAQHL
IDINRANKEAESVTVNFNRVKNNLAEAEFENAPLVLIIDDSVTVRELLSMTFKKAGYRVEQARDGQEAWEKLSDGLECDI
AFCDIEMPRMNGLELLSQLQQDEKLSSLPIAMLTSRGAKKMRNIAASRGANGYFVKPYVEDDLLKAAKRMMDGETLIKNE
DEG

Nucleotide

• Length: 3372 bp

>NTDB_id=1161605 SLP02_RS20125 WP_319422500.1 4122180..4125551(-) (pilL-C) [Pleurocapsa sp. FMAR1 isolate 44838]
ATGAGCAGTCAAGACAAGTCTTTAGAAACAAATGACAATCTAAATGAACCTTCAAAAGCTTCTGAAGGTTCAGCAGATTT
ATGGACAGAAGACGATGATTCTGAGATAGTAACAGAATTTATATCTGCCGAAACTTTAGATTCTGAAGAGTCTTCAACAG
CAGAAACTGACCAGACCAAAAAGAAAGTTTTGTCAGATGCCGATTTTGATAACTGGGATTTTCGCGATCCACTATTGGCT
GAGGATGGAAATACATTAGAGTCGAATCTAGTTTTAGATAATTCTCCTGAGCAAATTAAATCAAGTCCAGAAGTAGACGA
ACTCATCACCAACGATTCTCAACAAATAGATCTAGTTGAAGCAGACCTTCAAGAAAATATTGCTAAAGAAACTGATTTAA
ATAGTTCGGCAGATATAGAATTTGATGACTTAGAGTCTTTAACAGAAGCACTATTAAATCTAGAAGATTCCGAAGACATT
CAGCTTGATGATTTGAGCGAGTTTGAATCATTAACAGCCAAATATGCTCAGGAAAATAATTTAGAAGAGATCGATCTAAA
TATTTTAGATAAATTAGATGACTCAGCTTTAGACTTAGATAGTGCTAAAGATCTACAGCTTGATAGTCTTGAGCTTAATG
ATTTTGAAGGCTTAAGTGATCTAAATTCGCTGACGGCAGAAGGATTAGATAATGATCTCGACGGCATATTAGACTTAGAG
ACAGAAATAGAGTCTTTAGATTCTTTGGTGCTAGAGTCTACATCTGAAACAATAGAAAATTCCTTGGATTCTGATTTAGA
ATTATCATCCTTGGACTCATTGCTTGGCGATGAGGTTGATTCCTTGCTAGAGGTTGTACCTGCTGCTTTTGAGCGACCCA
AGGTTAGTCCTGCACCAGTAACTGTTAAAGTAAGTAACGAAGTAGCCGACCTTTCACCAGTCAATCAAGCCCAAAGTTTT
GACCAAACAATGAGGGTTTCGGTAAAGAAACTGGATGACCTCAATAACTTAATCGGAGAGCTAGTAGTTAAACGTAATCG
TTTAGAGGATGATCAAGAAAGATTGCGTCGCTTTTTAGATAACCTACTAGGTCATGTACAGTCTCTAGGAGATGCTGGAG
CTAAAATGCACGATATGTACGAGCGATCGCTTTTAGAAGGAGCATTAATCGCTAGTCGTCAGTCCCGTGCTAACTCAGCG
GTGGCTGCTGGTGGCTCTGGTTTTGGTAGCACTAGAGAAGCTCAAGCAGAAGGATTAGACGCGCTAGAGATGGATCGCTT
TAACGGCTTCCACTTAGTTTCTCAAGACATTATTGAGCTAATTGTCCGAGTTAGAGAAGCTGCATCAGATATTCAGTTTG
TGGTAGATGAAACGGACAAGGTTGCTCAAACTTTCCGTCAGGTAACCGGCCAGTTGCAAGACGGCATGAACTCTTCGCGG
ATGGTTGCTTTTGAGCAAACGACTGACCGACTACCTAGAGCAATTAGAGATATTTCCCGTAAGCAGAAAAAACAAACTCA
ACTTTATGTAGAAGGTAAAGATGTGCTAATCGATAAAATGATCGTCGAGCATCTTTATAATCCCATGACTCACTTGGTAA
ACAATGCCATCTCTCATGGGATTGAAAAGCCTGAAGAAAGACTGAAAAAAGGTAAACCAGAAGTAGGAAATATTAATATT
CGTGCCTTTATTCAAGGGAATCAGACTGTAATTACCGTTCGTGATGATGGGGCGGGAATCGATCTTGAAATTGTCAAGCA
AAAAGCGGTTGAGAAAAATCTCATCACTTGGGCGACAGCACAAAATTTGACAGAACAACAGGTTTATGAGCTGCTATTCC
ATCCAGGCTTTAGCACTAAAGACCAGGCTGATGACTTTGCTGGTCGTGGTGTAGGTATGGATGTAGTTAATACCGACCTC
AAAAAAATTCGTGGCTCGGTAAGCACTGAATCAGAAGTTGGCAAAGGTACAACTTTTACGATTCGCTTACCCCTTGTTTT
AAGTATCTGTAAAGCCCTAACCTGTGTAGACGATAATACAAAGATTGCTTTTCCCATTGACGGGGTAGAAGACACCAAAG
AATATTTACCCAGTGATATTACAACTAATGCCAACGGTCTGCGCTGTATTACCTGGAAAAATACCTTGTTACCGTTAAGA
CCTCTCAAGACTCTACTTAATTACAATCGCAAAATTCGTAGGGCTGGAATATATAATGCAAATCAAAACAACGACGATAC
TATTTCTGTAATTATTCTGCGCAGTTTAGATAATTTGTTAGCAGTTGAAGTAGATGAAGTTAAAGCCGAACAAGAAATCG
TAATTAAACAAATTGATGGCGCAATCCCGAAACCACCAGGTATAGCAGGAGCTACAGTTCTGGGTGATGGTACAATCATG
CCGATTGGTGACGTACTAGAGCTAATTGAAATTGCTCAAGGTAAGAGAACTATTGAAATTGGCTTTGATGTCCTGGCTGG
TGAAGCTGCCAGAAAACAGTTCCAGGCTGAAAGTATTCAGCAAGAGCCAATGGTATTGGTAGTTGATGACTCGATTACGG
TTCGAGAGCTACTATCAATGAGTTTTAATAAGCTGGGCTATCGGGTTGAGCAAGCTAGAGACGGTCAAGAAGCTTGGGAT
AAGCTGCGAGGTGGTTTAGTCTGCGACATGATCTTTAGCGATATTGAAATGCCTCGCATGAATGGTTTAGAACTGCTGTC
TAATCTGCATAAGGATCAATCCCTTAGATCTATTCCTGTTGCTATGTTGACTTCTCGTGGTGCCGATAAACATCGACAAA
TAGCTAATGACTTGGGTGCAAAAGCTTATTTAACTAAACCCTACACCGAAAAAGATTTGATGGATGTGGCGCAACATTTG
ATTGACATCAATCGGGCAAATAAAGAAGCTGAATCCGTCACCGTTAACTTTAATCGAGTTAAAAACAATCTGGCAGAAGC
GGAATTTGAGAATGCGCCTCTAGTCCTAATTATTGATGACTCGGTAACGGTACGAGAGCTATTGTCCATGACTTTTAAAA
AGGCTGGTTATCGTGTCGAACAAGCGCGAGATGGTCAAGAAGCCTGGGAAAAACTAAGTGATGGTTTAGAGTGTGACATC
GCTTTCTGTGATATCGAAATGCCCCGCATGAACGGTTTAGAACTGCTGTCTCAACTGCAACAAGACGAAAAACTATCATC
TTTACCGATCGCCATGCTAACTTCCCGTGGAGCGAAAAAAATGCGGAATATAGCAGCGTCTCGCGGGGCAAATGGCTATT
TTGTGAAACCTTATGTAGAAGATGATCTATTAAAAGCAGCTAAAAGAATGATGGATGGGGAAACGTTAATTAAAAATGAG
GACGAAGGCTAG

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (529-665)

• Signal transducing histidine kinase, homodimeric domain (H-kinase_dim) (322-475)

• Response regulator receiver domain (Response_reg) (995-1107)

• Response regulator receiver domain (Response_reg) (845-956)

• CheW-like domain (CheW) (678-810)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilL-C	Synechocystis sp. PCC 6803	53.346	93.143	0.497