Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   ACI6PE_RS05675 Genome accession   NZ_OY725319
Coordinates   1237242..1238519 (+) Length   425 a.a.
NCBI ID   WP_057730719.1    Uniprot ID   -
Organism   Levilactobacillus zymae strain LMG 22198     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1232242..1243519
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACI6PE_RS05645 (LZ22198_MCBDPFMK_01132) tsf 1232662..1233546 (+) 885 WP_057730707.1 translation elongation factor Ts -
  ACI6PE_RS05650 (LZ22198_MCBDPFMK_01133) pyrH 1233695..1234420 (+) 726 WP_057730709.1 UMP kinase -
  ACI6PE_RS05655 (LZ22198_MCBDPFMK_01134) frr 1234426..1234983 (+) 558 WP_057730712.1 ribosome recycling factor -
  ACI6PE_RS05660 (LZ22198_MCBDPFMK_01135) - 1235008..1235424 (+) 417 WP_057730714.1 hypothetical protein -
  ACI6PE_RS05665 (LZ22198_MCBDPFMK_01136) - 1235529..1236305 (+) 777 WP_057730715.1 isoprenyl transferase -
  ACI6PE_RS05670 (LZ22198_MCBDPFMK_01137) - 1236332..1237120 (+) 789 WP_057730717.1 phosphatidate cytidylyltransferase -
  ACI6PE_RS05675 (LZ22198_MCBDPFMK_01138) eeP 1237242..1238519 (+) 1278 WP_057730719.1 RIP metalloprotease RseP Regulator
  ACI6PE_RS05680 (LZ22198_MCBDPFMK_01139) - 1238548..1240260 (+) 1713 WP_057730721.1 proline--tRNA ligase -

Sequence


Protein


Download         Length: 425 a.a.        Molecular weight: 46101.56 Da        Isoelectric Point: 9.0712

>NTDB_id=1160609 ACI6PE_RS05675 WP_057730719.1 1237242..1238519(+) (eeP) [Levilactobacillus zymae strain LMG 22198]
MIKTIITFIIVFGILVIVHEFGHFYFAKRGGILVREFSIGMGPKLVYHRGKDGTTYTLRLLPVGGYVRMAGAEDDEEELK
PGTPVSLFIGEHDRVERINTSKKSTLFNGIPLEVTATDLENELWIEGYENGDESAVKRYAVDHDATIIESDGTELRIAPK
DVQFPSASLGRRLMTNFAGPMNNVLLAIVTFMLMSVAQGGVATGTNQVQVASSPVSVAQTAGVKTNDKIVAVNGKATKDW
TALSQAIQPLANKQTTLTIQRDGKTQKLTVTPKGEKSNGKTVGMIGITQAKDKNVGAILLSGFTQTWTMTKLLFGALWHM
VSGHFSLNDLGGPVAIFATTSQATQFGLVGILNFLAFLSLNLAIVNLLPIPALDGGKILLNLIEAVRRKPLSENVEAGIT
LVGVAFLVLLMLLVTWNDIERYFIR

Nucleotide


Download         Length: 1278 bp        

>NTDB_id=1160609 ACI6PE_RS05675 WP_057730719.1 1237242..1238519(+) (eeP) [Levilactobacillus zymae strain LMG 22198]
GTGATTAAAACGATTATTACCTTTATCATTGTCTTCGGCATCCTGGTGATTGTGCACGAATTCGGTCACTTTTACTTTGC
CAAACGCGGTGGCATTTTAGTCCGCGAATTTTCCATCGGGATGGGCCCCAAGTTGGTCTACCACCGGGGGAAAGATGGCA
CGACCTACACCTTGCGGCTCTTACCCGTGGGGGGCTATGTGCGCATGGCCGGGGCCGAAGACGATGAGGAAGAATTAAAA
CCCGGCACGCCGGTGAGTCTATTCATCGGGGAACACGATCGGGTGGAACGGATCAACACCAGTAAGAAGTCGACGCTGTT
CAACGGGATTCCGCTGGAGGTCACGGCGACGGACCTGGAAAATGAACTGTGGATCGAAGGGTACGAAAACGGCGATGAGT
CCGCGGTCAAACGGTACGCGGTCGATCACGATGCGACGATTATTGAGTCGGACGGGACCGAATTGCGCATTGCACCGAAG
GACGTACAGTTTCCGTCGGCGTCGTTAGGGCGGCGGCTGATGACCAACTTTGCCGGACCCATGAACAACGTTTTGTTGGC
GATCGTGACCTTTATGTTGATGTCCGTCGCCCAAGGCGGGGTCGCCACGGGGACCAATCAGGTTCAAGTGGCGAGTTCAC
CGGTCTCGGTCGCTCAGACGGCCGGGGTGAAGACCAACGATAAGATCGTGGCCGTTAACGGTAAGGCAACTAAGGACTGG
ACGGCATTGAGCCAGGCCATCCAACCGTTGGCCAACAAGCAGACCACGTTGACCATCCAACGTGACGGTAAGACGCAAAA
GTTGACGGTCACGCCTAAGGGCGAAAAGTCCAACGGGAAGACGGTCGGCATGATCGGGATTACCCAGGCCAAGGATAAAA
ACGTGGGGGCCATCCTGCTGTCCGGCTTTACCCAGACCTGGACCATGACCAAATTACTCTTTGGGGCGTTGTGGCACATG
GTTTCCGGGCACTTTAGCCTCAACGATTTGGGGGGGCCGGTGGCCATCTTTGCCACGACCTCGCAGGCTACCCAGTTCGG
GTTAGTCGGGATTTTAAACTTCCTGGCCTTCCTGTCCTTGAACCTGGCCATCGTCAATTTATTGCCAATTCCAGCCTTGG
ATGGTGGTAAAATATTATTAAACCTAATTGAAGCCGTTCGCCGTAAGCCATTGTCGGAAAACGTGGAAGCGGGGATTACC
TTGGTGGGGGTGGCCTTCTTGGTCCTCCTAATGCTCCTGGTAACCTGGAACGATATCGAACGCTACTTTATTCGGTAA

Domains


Predicted by InterproScan.

(7-410)

(214-261)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

48.951

100

0.494

  eeP Streptococcus thermophilus LMD-9

48.832

100

0.492


Multiple sequence alignment