Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   ACI6PF_RS04990 Genome accession   NZ_OY724138
Coordinates   1054414..1055676 (+) Length   420 a.a.
NCBI ID   WP_025085182.1    Uniprot ID   A0A0R1PJ02
Organism   Companilactobacillus paralimentarius strain R19079     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1049414..1060676
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACI6PF_RS04960 (CPR19079_NPKGKJFF_01006) rpsB 1049640..1050443 (+) 804 WP_025085176.1 30S ribosomal protein S2 -
  ACI6PF_RS04965 (CPR19079_NPKGKJFF_01007) tsf 1050511..1051386 (+) 876 WP_025085177.1 translation elongation factor Ts -
  ACI6PF_RS04970 (CPR19079_NPKGKJFF_01008) pyrH 1051555..1052286 (+) 732 WP_025085178.1 UMP kinase -
  ACI6PF_RS04975 (CPR19079_NPKGKJFF_01009) frr 1052279..1052836 (+) 558 WP_025085179.1 ribosome recycling factor -
  ACI6PF_RS04980 (CPR19079_NPKGKJFF_01010) - 1052845..1053585 (+) 741 WP_025085180.1 isoprenyl transferase -
  ACI6PF_RS04985 (CPR19079_NPKGKJFF_01011) - 1053600..1054394 (+) 795 WP_025085181.1 phosphatidate cytidylyltransferase -
  ACI6PF_RS04990 (CPR19079_NPKGKJFF_01012) eeP 1054414..1055676 (+) 1263 WP_025085182.1 RIP metalloprotease RseP Regulator
  ACI6PF_RS04995 (CPR19079_NPKGKJFF_01013) - 1055689..1057395 (+) 1707 WP_404327825.1 proline--tRNA ligase -

Sequence


Protein


Download         Length: 420 a.a.        Molecular weight: 45818.52 Da        Isoelectric Point: 9.7794

>NTDB_id=1160357 ACI6PF_RS04990 WP_025085182.1 1054414..1055676(+) (eeP) [Companilactobacillus paralimentarius strain R19079]
MTAIITFIIVFGILVIVHEFGHYYAAKKSGILVREFSVGMGPKIVAYRKNHTTYTLRLLPLGGYVRMAGAQEDDSDIQPG
TMASLVLNDQDKVIKIITSSKVYDANAVPVQISKSDLVDDLVIEGYENGDETVVKKYSVDHDATIVEEDGTEVQIAPRDV
QLQSVSVWKRMITNFAGPFNNFVLAVLAAILAAFMMNGVATNQLGHIEKNSIAQEAGLKVNDTIVGVNGKKTSSWTALST
NIQNNPGKKVTLKVESNKKLKTIKLIPKSVKSQGQSYGFIGIMPKTDSSAWAKIKYGFSYSWGTTVMVFHALGKMVSGGF
NINQLSGPVGIYSMTSKVASQGIINIILFTSMLSMNLGIVNLIPIPALDGGKILLNIVEAIRRKPIPEQYETVITLIGVG
ILVLLMIAVTWNDIQRFFIK

Nucleotide


Download         Length: 1263 bp        

>NTDB_id=1160357 ACI6PF_RS04990 WP_025085182.1 1054414..1055676(+) (eeP) [Companilactobacillus paralimentarius strain R19079]
ATGACCGCGATAATTACATTTATAATCGTTTTTGGAATATTAGTTATTGTCCATGAATTCGGACATTATTATGCTGCCAA
AAAATCAGGAATTTTGGTTCGTGAGTTTTCTGTAGGAATGGGTCCGAAAATCGTCGCTTACCGTAAGAATCATACGACAT
ACACATTGAGATTATTACCTTTAGGTGGATATGTACGTATGGCTGGTGCTCAGGAAGATGATTCTGATATTCAACCAGGA
ACGATGGCATCTTTAGTATTAAATGATCAAGATAAAGTAATAAAAATAATAACTTCCAGTAAGGTTTATGATGCAAATGC
GGTCCCCGTTCAAATTTCTAAATCAGATTTAGTCGATGATTTAGTGATTGAAGGGTATGAAAATGGCGACGAAACTGTCG
TTAAGAAATATTCAGTTGATCATGATGCAACAATTGTTGAAGAAGACGGTACTGAGGTTCAAATCGCACCACGCGATGTT
CAACTTCAGTCCGTTTCTGTTTGGAAGAGAATGATTACTAATTTTGCAGGTCCTTTCAATAATTTTGTTCTAGCAGTTTT
GGCAGCTATTTTAGCTGCTTTCATGATGAATGGTGTTGCCACTAATCAATTAGGTCATATCGAAAAGAATTCAATTGCTC
AAGAAGCAGGTTTGAAGGTTAACGATACGATTGTAGGTGTAAATGGCAAGAAGACTAGTTCATGGACTGCTTTATCAACT
AACATTCAAAATAACCCTGGTAAGAAAGTTACTTTAAAAGTTGAATCAAATAAAAAACTTAAAACAATTAAATTAATTCC
TAAGTCTGTTAAGTCACAAGGTCAAAGCTATGGGTTTATTGGTATTATGCCAAAAACTGATTCAAGTGCTTGGGCTAAGA
TTAAGTACGGCTTTTCATATAGTTGGGGAACGACCGTAATGGTGTTCCATGCATTAGGTAAAATGGTATCCGGTGGTTTT
AATATTAATCAATTATCAGGTCCGGTGGGGATCTACTCGATGACTTCAAAAGTGGCATCACAAGGTATTATTAATATTAT
TTTATTTACATCAATGCTATCGATGAATCTAGGTATTGTTAATTTAATTCCAATTCCAGCCTTAGATGGTGGAAAAATTT
TATTAAATATCGTTGAAGCAATCAGAAGAAAACCAATTCCTGAACAGTATGAAACTGTTATTACACTGATTGGTGTCGGA
ATTCTAGTCTTGTTGATGATTGCTGTTACATGGAATGATATTCAGCGCTTCTTTATAAAATAG

Domains


Predicted by InterproScan.

(6-405)

(208-255)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0R1PJ02

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

48.598

100

0.495

  eeP Streptococcus thermophilus LMD-9

48.364

100

0.493


Multiple sequence alignment