Detailed information NTG1159772

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: QOR71_RS06745
• Genome accession: NZ_OX461103
• Coordinates: 1326545..1327771 (-)
• Length: 408 a.a.
• NCBI ID: WP_000918412.1
• Uniprot ID: A0AAV3JKF5
• Organism: Streptococcus agalactiae isolate MRI Z2-149
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 1321545..1332771

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QOR71_RS06720	-	1322419..1323795 (-)	1377	WP_000427479.1	amino acid permease	-
QOR71_RS06725	-	1323925..1324575 (-)	651	WP_000120090.1	HXXEE domain-containing protein	-
QOR71_RS06730	-	1324733..1325056 (-)	324	WP_000959713.1	HXXEE domain-containing protein	-
QOR71_RS06735	-	1325328..1325957 (+)	630	WP_000140673.1	TetR/AcrR family transcriptional regulator	-
QOR71_RS06740	yihA	1325938..1326534 (-)	597	WP_283572963.1	ribosome biogenesis GTP-binding protein YihA/YsxC	-
QOR71_RS06745	clpX	1326545..1327771 (-)	1227	WP_000918412.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
QOR71_RS06750	-	1327989..1328483 (-)	495	WP_000166043.1	dihydrofolate reductase	-
QOR71_RS06755	-	1328563..1329402 (-)	840	WP_000158597.1	thymidylate synthase	-
QOR71_RS06760	-	1329556..1330728 (+)	1173	WP_001873466.1	hydroxymethylglutaryl-CoA synthase	-
QOR71_RS06765	-	1330730..1332013 (+)	1284	WP_000161688.1	hydroxymethylglutaryl-CoA reductase, degradative	-
QOR71_RS06770	-	1332105..1332554 (+)	450	WP_001039193.1	DUF1836 domain-containing protein	-

Sequence

Protein

• Length: 408 a.a.
• Molecular weight: 44850.28 Da
• Isoelectric Point: 4.4424

>NTDB_id=1159772 QOR71_RS06745 WP_000918412.1 1326545..1327771(-) (clpX) [Streptococcus agalactiae isolate MRI Z2-149]
MAGNRNNDMNVYCSFCGKSQDEVKKIIAGNGVFICNECVALSQEIIKEELAEEVLADLAEVPKPKELLEILNQYVVGQDR
AKRALAVAVYNHYKRVSYTESSDDDVDLQKSNILMIGPTGSGKTFLAQTLAKSLNVPFAIADATSLTEAGYVGEDVENIL
LKLIQAADYNVERAERGIIYVDEIDKIAKKGENVSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPNQEMIQINTKN
ILFIVGGAFDGIEDLVKQRLGEKIIGFGQTSRKIDDNASYMQEIISEDIQKFGLIPEFIGRLPVVAALELLTAEDLVRIL
TEPRNALVKQYQTLLSYDGVELEFDQDALLAIADKAIERKTGARGLRSIIEETMLDIMFEIPSQEDVTKVRITKAAVEGT
DKPVLETA

Nucleotide

• Length: 1227 bp

>NTDB_id=1159772 QOR71_RS06745 WP_000918412.1 1326545..1327771(-) (clpX) [Streptococcus agalactiae isolate MRI Z2-149]
ATGGCTGGGAATCGTAATAACGATATGAATGTCTATTGTTCATTTTGTGGCAAAAGCCAAGATGAAGTAAAAAAAATTAT
TGCAGGTAATGGTGTTTTCATTTGTAATGAATGTGTGGCCTTATCACAAGAAATTATTAAGGAAGAATTAGCTGAGGAAG
TACTTGCTGATTTAGCAGAAGTACCAAAACCTAAGGAACTATTAGAAATATTAAATCAATATGTTGTAGGGCAAGATCGT
GCTAAACGTGCTTTAGCAGTTGCTGTCTACAATCATTACAAGCGTGTTAGTTATACCGAGAGTAGTGACGATGATGTAGA
TTTGCAAAAATCCAACATTTTGATGATTGGTCCAACTGGCTCAGGAAAAACCTTCTTAGCACAAACACTAGCTAAAAGCC
TTAATGTACCGTTTGCTATTGCAGATGCGACTTCATTGACCGAAGCAGGATACGTTGGAGAAGATGTTGAGAATATTCTT
CTTAAATTGATTCAAGCTGCTGATTATAATGTCGAACGTGCTGAGCGTGGTATTATCTACGTTGATGAAATAGATAAAAT
TGCTAAGAAAGGCGAAAATGTTTCTATCACACGTGATGTATCTGGTGAAGGTGTACAGCAAGCCCTTCTTAAAATTATTG
AGGGTACGGTAGCAAGTGTTCCCCCACAGGGTGGGCGTAAACATCCTAACCAAGAAATGATTCAAATTAATACCAAGAAC
ATCCTTTTTATTGTCGGTGGTGCTTTTGATGGTATTGAAGACCTTGTGAAGCAACGTTTAGGCGAAAAAATTATTGGTTT
TGGACAGACAAGCCGCAAAATTGATGACAACGCTTCTTATATGCAAGAGATAATTTCTGAGGATATTCAAAAGTTTGGAC
TGATTCCAGAGTTTATTGGCCGTTTACCAGTAGTTGCAGCGTTAGAACTTCTTACTGCAGAAGATCTGGTTCGTATTCTG
ACAGAACCACGCAATGCTTTGGTTAAACAATACCAAACCTTATTATCTTATGATGGTGTAGAATTGGAATTTGATCAGGA
TGCTCTATTGGCTATCGCTGATAAGGCTATCGAGCGCAAGACTGGTGCACGTGGTTTACGTTCTATTATTGAAGAAACGA
TGCTTGATATCATGTTTGAAATTCCAAGCCAAGAAGATGTAACAAAAGTTCGTATCACAAAGGCTGCTGTTGAGGGTACT
GACAAGCCTGTTTTAGAGACGGCTTAG

Domains

Predicted by InterproScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (311-390)

• ClpX C4-type zinc finger (zf-C4_ClpX) (12-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (109-304)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	90.709	100	0.909
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	58	98.039	0.569