Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   QOS94_RS06895 Genome accession   NZ_OX460976
Coordinates   1492950..1494221 (+) Length   423 a.a.
NCBI ID   WP_229251320.1    Uniprot ID   -
Organism   Carnobacterium maltaromaticum strain SF2022 isolate SF2022     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1487950..1499221
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QOS94_RS06870 frr 1488500..1489057 (+) 558 WP_010053074.1 ribosome recycling factor -
  QOS94_RS06875 - 1489223..1489492 (-) 270 WP_010053076.1 hypothetical protein -
  QOS94_RS06880 - 1489785..1490561 (+) 777 WP_010053077.1 isoprenyl transferase -
  QOS94_RS06885 - 1490949..1491734 (+) 786 WP_229251322.1 phosphatidate cytidylyltransferase -
  QOS94_RS06890 - 1491794..1492936 (+) 1143 WP_229251321.1 1-deoxy-D-xylulose-5-phosphate reductoisomerase -
  QOS94_RS06895 eeP 1492950..1494221 (+) 1272 WP_229251320.1 RIP metalloprotease RseP Regulator
  QOS94_RS06900 - 1494346..1496052 (+) 1707 WP_010053082.1 proline--tRNA ligase -

Sequence

Protein


Download         Length: 423 a.a.        Molecular weight: 46201.25 Da        Isoelectric Point: 5.7042

>NTDB_id=1159509 QOS94_RS06895 WP_229251320.1 1492950..1494221(+) (eeP) [Carnobacterium maltaromaticum strain SF2022 isolate SF2022]
MVTTIITFLIVFSILVVVHEYGHYYFAKKSGILVREFAIGFGPKIFSYRKNGTTYTIRILPIGGYVRMAGYGEDETEIKP
GMPIGLIINSEGIVTTINTSKKTQLMEAVPMEVVSIDLEKDLHVEGYLAGNEDELVRYPVLHDATIIEEDGTEVQIAPID
VQFQSASLPKRMMTNFAGPMNNFILAILAFTVIAFMQGGVVSHSTQLGEIASDSVAAKAGLVQGDTILAVDGKKMSDWTM
LATTIQAHPAKEIKLDIETKAGKKETINVTPKSVKVEDKKIGQIGIGPAIDTSFGAKIAYGFTQTWFIMVQIVTVLGSIF
TKGFNIGMFSGPVGIYAATEQVVQIGFMGVFNFLAVLSINLGIVNLLPIPALDGGKLLLNIIEGIRRKPLDPDKEGIITM
VGFGLMMLLMILVTWNDIQRYFF

Nucleotide


Download         Length: 1272 bp        

>NTDB_id=1159509 QOS94_RS06895 WP_229251320.1 1492950..1494221(+) (eeP) [Carnobacterium maltaromaticum strain SF2022 isolate SF2022]
ATGGTAACAACGATTATCACATTTTTGATTGTTTTTAGTATTTTAGTAGTCGTACATGAATACGGACATTACTATTTTGC
TAAAAAATCGGGAATCCTCGTACGCGAATTCGCGATTGGATTTGGACCGAAAATTTTTTCTTATCGTAAAAATGGAACAA
CCTATACGATTAGAATTTTACCAATTGGTGGCTATGTACGCATGGCTGGTTACGGGGAAGATGAAACCGAAATTAAACCC
GGTATGCCGATTGGTTTAATTATTAATTCTGAAGGTATTGTGACAACGATTAATACCTCTAAGAAAACCCAATTGATGGA
AGCTGTTCCAATGGAAGTCGTTTCAATTGATTTGGAAAAGGATTTACACGTTGAAGGATATCTAGCAGGAAATGAAGACG
AGTTAGTTCGCTATCCTGTCTTACATGATGCGACTATTATTGAAGAAGACGGTACAGAGGTTCAGATTGCTCCGATTGAT
GTTCAATTTCAATCTGCAAGCTTACCTAAACGAATGATGACAAACTTTGCAGGACCCATGAATAATTTTATTTTAGCAAT
TTTAGCCTTTACCGTGATTGCTTTTATGCAAGGCGGGGTTGTGAGTCATAGTACGCAATTAGGTGAGATAGCCTCTGACA
GCGTAGCGGCTAAAGCTGGACTTGTTCAAGGCGATACTATTTTAGCAGTTGACGGAAAAAAAATGTCAGATTGGACAATG
TTAGCAACAACGATTCAAGCTCATCCAGCCAAAGAAATTAAATTGGATATTGAAACAAAAGCTGGAAAAAAAGAAACAAT
CAATGTAACACCTAAATCTGTAAAAGTTGAAGATAAAAAAATTGGTCAGATTGGAATTGGACCAGCAATTGATACTTCAT
TTGGAGCGAAGATTGCATACGGATTTACCCAAACATGGTTTATTATGGTTCAAATCGTAACAGTTTTAGGCTCTATTTTT
ACCAAAGGGTTTAATATTGGAATGTTCTCAGGTCCAGTAGGGATTTATGCAGCAACAGAGCAAGTCGTTCAAATTGGTTT
TATGGGCGTGTTTAATTTCCTAGCTGTTTTGAGTATTAATTTAGGTATTGTTAATTTACTTCCCATACCAGCTTTAGATG
GTGGAAAGTTATTGTTAAATATTATAGAAGGCATCAGACGCAAACCTTTAGATCCAGATAAAGAAGGTATCATTACAATG
GTTGGTTTTGGTTTAATGATGTTGTTGATGATTTTAGTGACTTGGAACGATATCCAACGCTATTTCTTTTAG

Domains

Predicted by InterproScan.

Peptidase family M50 (Peptidase_M50)

(7-409)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

48.244

100

0.487
  eeP Streptococcus thermophilus LMD-9

48.235

100

0.485

Multiple sequence alignment