Detailed information NTG1159419

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: QOS64_RS02050
• Genome accession: NZ_OX460973
• Coordinates: 410664..411812 (+)
• Length: 382 a.a.
• NCBI ID: WP_007410270.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain SAF3325 substr. 0 isolate SAF3325
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 405664..416812

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QOS64_RS02030	-	406061..406744 (-)	684	WP_168985153.1	ABC transporter ATP-binding protein	-
QOS64_RS02035	-	406759..408195 (-)	1437	WP_085341729.1	ABC transporter permease	-
QOS64_RS02040	-	408408..409091 (+)	684	WP_160242544.1	response regulator transcription factor	-
QOS64_RS02045	-	409078..410511 (+)	1434	WP_162992601.1	HAMP domain-containing sensor histidine kinase	-
QOS64_RS02050	rapC	410664..411812 (+)	1149	WP_007410270.1	Rap family tetratricopeptide repeat protein	Regulator
QOS64_RS02055	phrC	411796..411915 (+)	120	WP_003156334.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
QOS64_RS02060	-	412064..412159 (-)	96	WP_012116800.1	YjcZ family sporulation protein	-
QOS64_RS02065	-	412254..413618 (-)	1365	WP_136396097.1	aspartate kinase	-
QOS64_RS02070	ceuB	414032..414985 (+)	954	WP_059366593.1	ABC transporter permease	Machinery gene
QOS64_RS02075	-	414975..415922 (+)	948	WP_007410274.1	iron chelate uptake ABC transporter family permease subunit	-
QOS64_RS02080	-	415916..416674 (+)	759	WP_063096189.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45475.70 Da
• Isoelectric Point: 4.9916

>NTDB_id=1159419 QOS64_RS02050 WP_007410270.1 410664..411812(+) (rapC) [Bacillus velezensis strain SAF3325 substr. 0 isolate SAF3325]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=1159419 QOS64_RS02050 WP_007410270.1 410664..411812(+) (rapC) [Bacillus velezensis strain SAF3325 substr. 0 isolate SAF3325]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGATTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTCGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCGCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAAATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568