Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   QOS64_RS01840 Genome accession   NZ_OX460973
Coordinates   349463..349861 (-) Length   132 a.a.
NCBI ID   WP_007609299.1    Uniprot ID   -
Organism   Bacillus velezensis strain SAF3325 substr. 0 isolate SAF3325     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 344463..354861
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QOS64_RS01815 - 344634..345836 (+) 1203 WP_060563058.1 GTP-binding protein -
  QOS64_RS01820 - 345901..347037 (+) 1137 WP_076425805.1 zinc-dependent alcohol dehydrogenase -
  QOS64_RS01825 - 347052..347486 (+) 435 WP_007409358.1 RDD family protein -
  QOS64_RS01830 - 347559..347882 (+) 324 WP_168985161.1 YckD family protein -
  QOS64_RS01835 - 347986..349422 (+) 1437 WP_076425807.1 family 1 glycosylhydrolase -
  QOS64_RS01840 nin/comJ 349463..349861 (-) 399 WP_007609299.1 competence protein ComJ Regulator
  QOS64_RS01845 nucA/comI 349882..350319 (-) 438 WP_003156588.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  QOS64_RS01850 hxlB 350678..351235 (-) 558 WP_076425808.1 6-phospho-3-hexuloisomerase -
  QOS64_RS01855 hxlA 351232..351867 (-) 636 WP_015239130.1 3-hexulose-6-phosphate synthase -
  QOS64_RS01860 - 352099..352461 (+) 363 WP_007409352.1 helix-turn-helix domain-containing protein -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14977.03 Da        Isoelectric Point: 4.9712

>NTDB_id=1159416 QOS64_RS01840 WP_007609299.1 349463..349861(-) (nin/comJ) [Bacillus velezensis strain SAF3325 substr. 0 isolate SAF3325]
MIKSWKPQELAISYHQFTIFQKDSEPPVIDWTDEAIEKGYAEADGAVSFEARRNTRAFIVLRLNTSEPVPSYEKKATVPF
EAVKDGIEIESVMSKRLFFHIPKGRYSLTCYSVPAEISDLHADTYIIDAAAM

Nucleotide


Download         Length: 399 bp        

>NTDB_id=1159416 QOS64_RS01840 WP_007609299.1 349463..349861(-) (nin/comJ) [Bacillus velezensis strain SAF3325 substr. 0 isolate SAF3325]
TTGATTAAATCATGGAAACCGCAAGAACTGGCCATTTCTTATCATCAATTTACAATCTTCCAAAAAGATTCAGAACCGCC
TGTTATCGATTGGACCGATGAAGCCATTGAAAAAGGATATGCGGAAGCTGACGGAGCTGTTTCATTTGAGGCAAGGAGAA
ATACGAGGGCATTTATCGTTCTCAGGCTTAACACAAGTGAACCGGTACCATCCTATGAGAAAAAAGCGACTGTTCCCTTT
GAGGCTGTAAAAGATGGAATTGAGATTGAAAGCGTGATGTCCAAGCGGCTTTTCTTTCATATTCCGAAAGGCCGATACAG
CCTTACCTGTTATTCAGTGCCTGCCGAAATATCCGATCTTCATGCGGATACGTATATTATTGATGCAGCCGCAATGTAA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

75.758

100

0.758

Multiple sequence alignment