Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   QOR54_RS09910 Genome accession   NZ_OX460968
Coordinates   1952533..1953792 (-) Length   419 a.a.
NCBI ID   WP_000900651.1    Uniprot ID   -
Organism   Streptococcus agalactiae isolate MRI Z2-342     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1947533..1958792
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QOR54_RS09900 - 1949879..1950463 (-) 585 WP_000842266.1 glycoside hydrolase family 73 protein -
  QOR54_RS09905 - 1950588..1952441 (-) 1854 WP_000814043.1 proline--tRNA ligase -
  QOR54_RS09910 eeP 1952533..1953792 (-) 1260 WP_000900651.1 RIP metalloprotease RseP Regulator
  QOR54_RS09915 - 1953823..1954617 (-) 795 WP_000664683.1 phosphatidate cytidylyltransferase -
  QOR54_RS09920 - 1954632..1955384 (-) 753 WP_000469560.1 isoprenyl transferase -
  QOR54_RS09925 yajC 1955550..1955891 (-) 342 WP_000056607.1 preprotein translocase subunit YajC -
  QOR54_RS09930 - 1955968..1956312 (-) 345 WP_000286789.1 thioredoxin domain-containing protein -
  QOR54_RS09935 - 1956503..1957666 (-) 1164 WP_001293700.1 NADP-dependent malic enzyme -

Sequence

Protein


Download         Length: 419 a.a.        Molecular weight: 46030.99 Da        Isoelectric Point: 9.9616

>NTDB_id=1159405 QOR54_RS09910 WP_000900651.1 1952533..1953792(-) (eeP) [Streptococcus agalactiae isolate MRI Z2-342]
MLGILTFIIIFGVIVVVHEFGHFYFAKKSGILVREFAIGMGPKIFSHIDKEGTTYTIRILPLGGYVRMAGWGDDKTEIKT
GTPASLTLNKEGIVTRINLSGKQLDNTSLPINVTAYDLEDKLTITGLVLSETKTYSVDHDATIIEEDGTEIRIAPLDVQY
QNASVWGRLITNFAGPMNNFILGLVVFIALAFIQGGVQDLSTNQVRVSENGPAASAGLKNNDRILQIGSHKVSNWEQLTA
AVEKSTSHLEKNQKLALKIKSKEVVKTINVKPQKVDKSYIIGIMPALKTSFKDKLLGGFKLAWESFFRILNELKKLIAHF
SINKLGGPVALYQASSQAAKNGFVTVLNLMGLISINLGIMNLIPIPALDGGKIVMNILEAIRRKPLKQETETYITLAGVA
VMLVLMIAVTWNDIMRAFF

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=1159405 QOR54_RS09910 WP_000900651.1 1952533..1953792(-) (eeP) [Streptococcus agalactiae isolate MRI Z2-342]
ATGCTAGGAATTTTAACCTTTATTATTATTTTTGGTGTCATTGTAGTTGTTCACGAATTTGGGCATTTCTATTTTGCAAA
GAAATCAGGAATTCTTGTTCGTGAATTTGCTATTGGTATGGGTCCAAAAATCTTTTCTCACATTGATAAAGAAGGAACAA
CCTATACTATTCGTATATTACCGCTAGGTGGTTATGTCCGTATGGCTGGTTGGGGTGATGATAAGACTGAAATTAAGACA
GGGACGCCGGCTAGCCTTACTTTAAATAAAGAAGGCATTGTAACTCGTATTAATTTATCAGGAAAACAATTAGACAATAC
TTCTTTACCAATCAATGTAACAGCTTATGATTTAGAAGATAAACTAACTATCACAGGATTGGTCTTAAGTGAGACAAAAA
CCTATAGTGTTGATCACGATGCTACTATCATTGAGGAGGATGGTACTGAAATTCGTATTGCTCCCTTAGATGTGCAGTAT
CAGAATGCTTCTGTATGGGGGCGCTTAATTACCAATTTTGCAGGTCCGATGAATAATTTTATTTTAGGTCTTGTAGTCTT
TATTGCACTTGCTTTTATTCAAGGAGGTGTTCAAGATTTATCAACCAATCAGGTCCGTGTATCAGAAAATGGTCCTGCTG
CTAGTGCAGGTTTAAAAAATAATGACCGTATTTTACAAATAGGGTCGCACAAAGTTTCTAACTGGGAACAGTTGACAGCA
GCAGTAGAAAAGTCAACTAGTCATTTAGAAAAAAACCAAAAACTTGCCCTTAAAATTAAGAGCAAAGAGGTGGTGAAAAC
GATCAACGTTAAGCCACAGAAAGTTGATAAATCCTACATCATCGGCATTATGCCAGCTCTAAAGACAAGCTTTAAAGACA
AGCTTTTAGGTGGATTTAAACTAGCATGGGAAAGTTTCTTTAGAATTTTAAATGAATTAAAGAAACTTATTGCTCATTTT
AGTATTAATAAATTGGGAGGTCCAGTAGCTCTCTATCAGGCTAGTAGCCAAGCTGCTAAAAATGGTTTCGTCACAGTTCT
CAACTTAATGGGATTAATCTCTATCAACTTAGGTATTATGAATCTCATCCCTATACCAGCCCTTGACGGGGGTAAGATAG
TGATGAATATTTTAGAAGCCATTCGTCGCAAACCACTTAAACAAGAAACAGAAACTTATATTACGCTCGCTGGGGTAGCA
GTTATGTTAGTATTAATGATTGCTGTAACCTGGAACGATATCATGCGAGCTTTCTTCTAA

Domains

Predicted by InterproScan.

Peptidase family M50 (Peptidase_M50)

(6-405)

PDZ domain (PDZ_2)

(205-271)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

69.524

100

0.697
  eeP Streptococcus thermophilus LMD-9

69.286

100

0.695

Multiple sequence alignment