Detailed information NTG1159396

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: QOR54_RS07175
• Genome accession: NZ_OX460968
• Coordinates: 1396153..1397379 (-)
• Length: 408 a.a.
• NCBI ID: WP_000918412.1
• Uniprot ID: A0AAV3JKF5
• Organism: Streptococcus agalactiae isolate MRI Z2-342
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 1391153..1402379

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QOR54_RS07150	-	1392028..1393404 (-)	1377	Protein_1332	amino acid permease	-
QOR54_RS07155	-	1393534..1394183 (-)	650	Protein_1333	HXXEE domain-containing protein	-
QOR54_RS07160	-	1394341..1394664 (-)	324	WP_001867206.1	HXXEE domain-containing protein	-
QOR54_RS07165	-	1394936..1395565 (+)	630	WP_000140673.1	TetR/AcrR family transcriptional regulator	-
QOR54_RS07170	yihA	1395546..1396142 (-)	597	WP_000796925.1	ribosome biogenesis GTP-binding protein YihA/YsxC	-
QOR54_RS07175	clpX	1396153..1397379 (-)	1227	WP_000918412.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
QOR54_RS07180	-	1397597..1398091 (-)	495	WP_000166043.1	dihydrofolate reductase	-
QOR54_RS07185	-	1398171..1399010 (-)	840	WP_000158597.1	thymidylate synthase	-
QOR54_RS07190	-	1399164..1400336 (+)	1173	WP_001873466.1	hydroxymethylglutaryl-CoA synthase	-
QOR54_RS07195	-	1400338..1401621 (+)	1284	WP_000161688.1	hydroxymethylglutaryl-CoA reductase, degradative	-
QOR54_RS07200	-	1401713..1402162 (+)	450	WP_001039193.1	DUF1836 domain-containing protein	-

Sequence

Protein

• Length: 408 a.a.
• Molecular weight: 44850.28 Da
• Isoelectric Point: 4.4424

>NTDB_id=1159396 QOR54_RS07175 WP_000918412.1 1396153..1397379(-) (clpX) [Streptococcus agalactiae isolate MRI Z2-342]
MAGNRNNDMNVYCSFCGKSQDEVKKIIAGNGVFICNECVALSQEIIKEELAEEVLADLAEVPKPKELLEILNQYVVGQDR
AKRALAVAVYNHYKRVSYTESSDDDVDLQKSNILMIGPTGSGKTFLAQTLAKSLNVPFAIADATSLTEAGYVGEDVENIL
LKLIQAADYNVERAERGIIYVDEIDKIAKKGENVSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPNQEMIQINTKN
ILFIVGGAFDGIEDLVKQRLGEKIIGFGQTSRKIDDNASYMQEIISEDIQKFGLIPEFIGRLPVVAALELLTAEDLVRIL
TEPRNALVKQYQTLLSYDGVELEFDQDALLAIADKAIERKTGARGLRSIIEETMLDIMFEIPSQEDVTKVRITKAAVEGT
DKPVLETA

Nucleotide

• Length: 1227 bp

>NTDB_id=1159396 QOR54_RS07175 WP_000918412.1 1396153..1397379(-) (clpX) [Streptococcus agalactiae isolate MRI Z2-342]
ATGGCTGGGAATCGTAATAACGATATGAATGTCTATTGTTCATTTTGTGGCAAAAGCCAAGATGAAGTAAAAAAAATTAT
TGCAGGTAATGGTGTTTTCATTTGTAATGAATGTGTGGCCTTATCACAAGAAATTATTAAGGAAGAATTAGCTGAGGAAG
TACTTGCTGATTTAGCAGAAGTACCAAAACCTAAGGAACTATTAGAAATATTAAATCAATATGTTGTAGGGCAAGATCGT
GCTAAACGTGCTTTAGCAGTTGCTGTCTACAATCATTACAAGCGTGTTAGTTATACCGAGAGTAGTGACGATGATGTAGA
TTTGCAAAAATCCAACATTTTGATGATTGGTCCAACTGGCTCAGGAAAAACCTTCTTAGCACAAACACTAGCTAAAAGCC
TTAATGTACCGTTTGCTATTGCAGATGCGACTTCATTGACCGAAGCAGGATACGTTGGAGAAGATGTTGAGAATATTCTT
CTTAAATTGATTCAAGCTGCTGATTATAATGTCGAACGTGCTGAGCGTGGTATTATCTACGTTGATGAAATAGATAAAAT
TGCTAAGAAAGGCGAAAATGTTTCTATCACACGTGATGTATCTGGTGAAGGTGTACAGCAAGCCCTTCTTAAAATTATTG
AGGGTACGGTAGCAAGTGTTCCCCCACAGGGTGGGCGTAAACATCCTAACCAAGAAATGATTCAAATTAATACCAAGAAC
ATCCTTTTTATTGTCGGTGGTGCTTTTGATGGTATTGAAGACCTTGTGAAGCAACGTTTAGGCGAAAAAATTATTGGTTT
TGGACAGACAAGCCGCAAAATTGATGACAACGCTTCTTATATGCAAGAGATAATTTCTGAGGATATTCAAAAGTTTGGAC
TGATTCCAGAGTTTATTGGCCGTTTACCAGTAGTTGCAGCGTTAGAACTTCTTACTGCAGAAGATCTGGTTCGTATTCTG
ACAGAACCACGCAATGCTTTGGTTAAACAATACCAAACCTTATTATCTTATGATGGTGTAGAATTGGAATTTGATCAGGA
TGCTCTATTGGCTATCGCTGATAAGGCTATCGAGCGCAAGACTGGTGCACGTGGTTTACGTTCTATTATTGAAGAAACGA
TGCTTGATATCATGTTTGAAATTCCAAGCCAAGAAGATGTAACAAAAGTTCGTATCACAAAGGCTGCTGTTGAGGGTACT
GACAAGCCTGTTTTAGAGACGGCTTAG

Domains

Predicted by InterproScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (311-390)

• ClpX C4-type zinc finger (zf-C4_ClpX) (12-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (109-304)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	90.709	100	0.909
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	58	98.039	0.569