Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   QOR58_RS05545 Genome accession   NZ_OX460941
Coordinates   1054409..1055371 (-) Length   320 a.a.
NCBI ID   WP_000735590.1    Uniprot ID   -
Organism   Streptococcus agalactiae isolate MRI Z2-304     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1049409..1060371
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QOR58_RS05525 dprA 1050609..1051451 (-) 843 WP_001015250.1 DNA-processing protein DprA Machinery gene
  QOR58_RS05530 - 1051590..1052618 (-) 1029 WP_000162771.1 siderophore ABC transporter substrate-binding protein -
  QOR58_RS05535 - 1052680..1053441 (-) 762 WP_000614759.1 ATP-binding cassette domain-containing protein -
  QOR58_RS05540 - 1053438..1054412 (-) 975 WP_000588579.1 iron chelate uptake ABC transporter family permease subunit -
  QOR58_RS05545 ceuB 1054409..1055371 (-) 963 WP_000735590.1 iron chelate uptake ABC transporter family permease subunit Machinery gene
  QOR58_RS05550 - 1055611..1056159 (-) 549 WP_000136503.1 sugar O-acetyltransferase -
  QOR58_RS05555 - 1056180..1056941 (-) 762 WP_000201086.1 ribonuclease HII -
  QOR58_RS05560 ylqF 1056928..1057779 (-) 852 WP_000201279.1 ribosome biogenesis GTPase YlqF -
  QOR58_RS05565 - 1058055..1058627 (-) 573 WP_001232337.1 L,D-transpeptidase -
  QOR58_RS05570 - 1058829..1060313 (-) 1485 WP_000256021.1 carbon starvation CstA family protein -

Sequence

Protein


Download         Length: 320 a.a.        Molecular weight: 34923.06 Da        Isoelectric Point: 8.4842

>NTDB_id=1159149 QOR58_RS05545 WP_000735590.1 1054409..1055371(-) (ceuB) [Streptococcus agalactiae isolate MRI Z2-304]
MKKLLTTPVMGCTLVILSLTSLFVGVKSIPLEQITHLDQSQVDIFLTSRLPRTISILISGASLSVCGLLMQQLTQNKFVS
PTTSGTMDWAKLGVVVTLIFFKNTSIFIQLCIASGFAILGSLLFVTILKMITFKDNIFIPLIGLMLGQIVAAVTVFLGTH
FQVLQSVNSWLQGNFSIMTSHRYEILYLALPCLFLVYFFAHQFTIVGLGESFAKNLGIAYEKMIYFGLVLVSIMTSLVII
IVGALPFLGLIVPNLISLTKGDHMSSTILETSLLGACIVMICDLFGRLVIFPYEVSIGVTLGVLGSAFFLISIIRNEGKS

Nucleotide


Download         Length: 963 bp        

>NTDB_id=1159149 QOR58_RS05545 WP_000735590.1 1054409..1055371(-) (ceuB) [Streptococcus agalactiae isolate MRI Z2-304]
ATGAAAAAGCTATTAACCACTCCTGTAATGGGTTGTACTTTGGTTATACTTTCTCTAACGTCCCTATTTGTTGGTGTGAA
ATCTATCCCACTGGAGCAAATAACACACCTTGATCAATCACAGGTAGATATTTTTTTAACGAGTCGCTTACCAAGAACCA
TTAGTATCCTAATATCTGGTGCAAGTTTGTCAGTCTGTGGCCTGCTGATGCAACAACTCACCCAAAACAAGTTCGTTTCA
CCGACAACTTCAGGGACTATGGATTGGGCGAAATTAGGAGTAGTTGTTACGCTGATTTTCTTTAAAAATACCTCTATTTT
TATTCAACTATGTATTGCTTCAGGTTTTGCCATTTTAGGATCGCTGCTTTTTGTAACTATTTTAAAAATGATTACTTTTA
AGGATAATATTTTTATACCTCTTATCGGATTGATGCTTGGACAAATTGTAGCAGCAGTAACAGTATTTTTAGGAACACAT
TTTCAAGTACTACAATCTGTCAATAGTTGGCTTCAAGGTAATTTTTCCATCATGACTAGCCATCGCTATGAAATTCTTTA
CTTAGCATTGCCATGTTTGTTTTTAGTGTATTTTTTTGCTCATCAGTTTACCATTGTTGGGCTTGGAGAAAGCTTCGCTA
AAAATTTAGGGATTGCTTATGAAAAGATGATTTACTTTGGTTTAGTTTTGGTTTCAATTATGACATCCCTAGTCATTATT
ATCGTAGGAGCTTTACCTTTCTTAGGTTTAATCGTACCTAATCTAATTAGCTTAACTAAAGGGGATCATATGTCCTCAAC
TATCTTAGAGACATCGCTTTTAGGGGCTTGTATCGTCATGATATGTGATCTTTTTGGTCGCTTAGTTATTTTTCCTTATG
AAGTCTCAATAGGAGTTACGCTAGGAGTATTGGGTAGTGCCTTTTTCTTGATTTCAATTATAAGAAATGAGGGAAAATCA
TGA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(14-315)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

48.276

99.688

0.481

Multiple sequence alignment