Detailed information NTG1158989

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: QOR45_RS06065
• Genome accession: NZ_OX460935
• Coordinates: 1179264..1180490 (-)
• Length: 408 a.a.
• NCBI ID: WP_283572290.1
• Uniprot ID: -
• Organism: Streptococcus agalactiae isolate MRI Z2-286
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 1174264..1185490

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QOR45_RS06040	-	1175137..1176513 (-)	1377	Protein_1114	amino acid permease	-
QOR45_RS06045	-	1176643..1177293 (-)	651	WP_000120090.1	HXXEE domain-containing protein	-
QOR45_RS06050	-	1177451..1177774 (-)	324	WP_283572162.1	HXXEE domain-containing protein	-
QOR45_RS06055	-	1178047..1178595 (+)	549	WP_047209499.1	TetR/AcrR family transcriptional regulator	-
QOR45_RS06060	yihA	1178657..1179253 (-)	597	WP_000796925.1	ribosome biogenesis GTP-binding protein YihA/YsxC	-
QOR45_RS06065	clpX	1179264..1180490 (-)	1227	WP_283572290.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
QOR45_RS06070	-	1180708..1181202 (-)	495	WP_000166043.1	dihydrofolate reductase	-
QOR45_RS06075	-	1181282..1182121 (-)	840	WP_000158595.1	thymidylate synthase	-
QOR45_RS06080	-	1182275..1183447 (+)	1173	WP_001873152.1	hydroxymethylglutaryl-CoA synthase	-
QOR45_RS06085	-	1183449..1184732 (+)	1284	WP_283572163.1	hydroxymethylglutaryl-CoA reductase, degradative	-
QOR45_RS06090	-	1184824..1185272 (+)	449	Protein_1124	DUF1836 domain-containing protein	-

Sequence

Protein

• Length: 408 a.a.
• Molecular weight: 44835.31 Da
• Isoelectric Point: 4.5016

>NTDB_id=1158989 QOR45_RS06065 WP_283572290.1 1179264..1180490(-) (clpX) [Streptococcus agalactiae isolate MRI Z2-286]
MAGNRNNDMNVYCSFCGKSQDEVKKIIAGNGVFICNECVALSQEIIKEELAEEVLADLAEVPKPKELLEILNQYVVGQDR
AKRALAVAVYNHYKRVSYTESSDDDVDLQKSNILMIGPTGSGKTFLAQTLAKSLNVPFAIADATSLTEAGYVGEDVENIL
LKLIQAADYNVERAERGIIYVDEIDKIAKKGENVSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPNQEMIQINTKN
ILFIVGGAFDGIEDLVKQRLGEKVIGFGQTSRKIDDNASYMQEIISEDIQKFGLIPEFIGRLPVVAALELLTAKDLVRIL
TEPRNALVKQYQTLLSYDGVELEFDQDALLAIADKAIERKTGARGLRSIIEETMLDIMFEIPSQEDVTKVRITKAAVEGT
DKPVLETA

Nucleotide

• Length: 1227 bp

>NTDB_id=1158989 QOR45_RS06065 WP_283572290.1 1179264..1180490(-) (clpX) [Streptococcus agalactiae isolate MRI Z2-286]
ATGGCTGGGAATCGTAATAACGATATGAATGTCTATTGTTCATTTTGTGGCAAAAGCCAAGATGAAGTAAAAAAAATTAT
TGCAGGTAATGGTGTTTTCATTTGTAATGAATGTGTGGCCTTATCACAAGAAATTATTAAGGAAGAATTAGCTGAGGAAG
TACTGGCTGATTTAGCAGAAGTACCAAAACCTAAGGAACTATTAGAAATATTAAATCAATATGTTGTAGGGCAAGATCGT
GCTAAACGTGCTTTAGCAGTTGCTGTCTACAATCATTACAAGCGTGTTAGTTATACCGAGAGTAGTGACGATGATGTAGA
TTTGCAAAAATCCAACATTTTGATGATTGGTCCAACTGGCTCAGGAAAAACCTTCTTAGCACAAACACTGGCTAAAAGCC
TTAATGTACCATTTGCTATTGCAGATGCGACTTCATTGACCGAAGCAGGATACGTTGGAGAAGATGTTGAGAATATTCTT
CTTAAATTGATTCAAGCTGCTGATTATAATGTCGAACGTGCTGAGCGTGGTATTATCTACGTTGATGAAATAGATAAAAT
TGCTAAGAAAGGCGAAAATGTTTCTATCACACGTGATGTGTCTGGTGAAGGTGTACAGCAAGCCCTTCTTAAAATTATTG
AGGGTACGGTAGCAAGTGTTCCCCCACAGGGTGGGCGTAAACATCCTAACCAAGAAATGATTCAAATTAATACCAAGAAC
ATCCTTTTTATTGTCGGTGGTGCTTTTGATGGTATTGAAGACCTTGTGAAGCAACGTTTAGGCGAAAAAGTTATTGGTTT
TGGACAGACAAGCCGCAAAATTGATGACAACGCTTCTTATATGCAAGAGATAATTTCTGAGGATATTCAAAAGTTTGGAC
TGATTCCAGAGTTTATTGGCCGTTTACCAGTAGTTGCAGCGTTAGAACTTCTTACTGCAAAAGATCTGGTTCGTATTCTG
ACAGAACCACGCAATGCTTTGGTTAAACAATACCAAACCTTATTATCTTATGATGGTGTAGAATTGGAATTTGATCAGGA
TGCTCTATTGGCTATCGCTGATAAGGCTATCGAGCGCAAGACTGGTGCACGTGGTTTACGTTCTATTATTGAAGAAACGA
TGCTTGATATCATGTTTGAAATTCCAAGCCAAGAAGATGTAACAAAAGTTCGTATCACAAAGGCTGCTGTTGAGGGTACT
GACAAGCCTGTTTTAGAGACGGCTTAG

Domains

Predicted by InterproScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (311-390)

• AAA domain (Cdc48 subfamily) (AAA_2) (109-304)

• ClpX C4-type zinc finger (zf-C4_ClpX) (12-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	90.465	100	0.907
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	58	98.039	0.569