Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptB   Type   Regulator
Locus tag   QOR45_RS02530 Genome accession   NZ_OX460935
Coordinates   444450..445484 (+) Length   344 a.a.
NCBI ID   WP_000732719.1    Uniprot ID   A0AAD2WVT6
Organism   Streptococcus agalactiae isolate MRI Z2-286     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 439450..450484
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QOR45_RS02505 - 440303..440599 (-) 297 WP_000690177.1 hypothetical protein -
  QOR45_RS02510 - 440596..441015 (-) 420 WP_000368097.1 HIT family protein -
  QOR45_RS02515 - 441351..441854 (+) 504 WP_000773456.1 hypothetical protein -
  QOR45_RS02520 - 441906..443384 (-) 1479 WP_115356357.1 IS1182-like element IS1563 family transposase -
  QOR45_RS02525 pptA 443723..444448 (+) 726 WP_000912311.1 ABC transporter ATP-binding protein Regulator
  QOR45_RS02530 pptB 444450..445484 (+) 1035 WP_000732719.1 ABC transporter permease Regulator
  QOR45_RS02535 - 445542..446342 (+) 801 WP_000155920.1 phosphotransferase family protein -
  QOR45_RS02540 trmB 446332..446967 (+) 636 WP_001266022.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  QOR45_RS02550 rimP 447455..447931 (+) 477 WP_047209118.1 ribosome maturation factor RimP -
  QOR45_RS02555 nusA 447967..449118 (+) 1152 WP_000032296.1 transcription termination factor NusA -
  QOR45_RS02560 - 449140..449436 (+) 297 WP_001140526.1 YlxR family protein -
  QOR45_RS02565 - 449429..449731 (+) 303 WP_001065560.1 YlxQ-related RNA-binding protein -

Sequence


Protein


Download         Length: 344 a.a.        Molecular weight: 40338.72 Da        Isoelectric Point: 10.4984

>NTDB_id=1158976 QOR45_RS02530 WP_000732719.1 444450..445484(+) (pptB) [Streptococcus agalactiae isolate MRI Z2-286]
MKKLFNKRRSLFLTQNSKYLRYVFNDHFVLVLMFLSGFLLYQYSRLLKDFPKTHWPIIVIVSIIILMLLAMGEIASYLEP
ADKQFLLIKEEAIKEIINSAKKRTYIFWLVIQTLFLVLISPILIKLGLSVFMITLLIFGLGIIKWLVITYKVKVFYNNQN
LNWDAAINHEQERKQSILKFFSLFTNVKGISTSVKRRSFLDGILKLISKTPSRLWTNLFVRAFLRSSDYLGLTIRLVTLN
ILSVIFVNETYLALALAFVFNYLLLFQLLALGHHFDYQYMNQLYPVRLNAKASQLKGFLRVLSYAMTVIDSILIRELKPV
ILLIVLMLIVTEYYIPYKIKKMID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=1158976 QOR45_RS02530 WP_000732719.1 444450..445484(+) (pptB) [Streptococcus agalactiae isolate MRI Z2-286]
ATGAAAAAGTTATTTAATAAACGTCGAAGTCTCTTTTTAACTCAAAATAGTAAATATTTGAGATACGTCTTTAATGATCA
TTTTGTATTAGTATTAATGTTTTTGTCAGGTTTTTTGTTATATCAGTATAGCCGATTACTAAAAGACTTTCCAAAAACAC
ATTGGCCAATTATCGTGATTGTGTCAATCATTATCTTAATGTTACTAGCGATGGGGGAAATAGCCAGCTATTTAGAACCG
GCTGATAAACAATTTTTACTTATAAAAGAAGAAGCAATAAAGGAAATTATAAATTCTGCTAAAAAACGGACTTATATCTT
TTGGTTGGTTATTCAAACCTTATTTTTAGTATTAATATCACCAATTTTGATAAAGCTAGGCTTGTCAGTTTTTATGATTA
CATTGTTAATTTTTGGTCTAGGAATAATCAAATGGTTGGTGATAACTTACAAGGTAAAGGTCTTTTATAACAATCAAAAT
TTGAACTGGGATGCAGCTATAAATCATGAGCAGGAAAGAAAACAGAGTATATTAAAATTTTTCTCTTTGTTTACAAATGT
TAAGGGAATTTCGACAAGTGTAAAACGTCGTTCATTTTTAGATGGTATTTTAAAGCTTATTTCTAAAACGCCATCGCGTT
TATGGACTAACTTATTTGTGAGGGCATTTCTAAGAAGCTCAGATTATCTTGGTTTAACAATAAGGTTGGTAACTTTAAAT
ATCTTATCAGTCATCTTTGTTAACGAAACCTACCTCGCCCTTGCTCTGGCATTTGTATTTAACTACTTATTATTGTTCCA
ACTATTAGCTTTAGGTCACCATTTTGATTATCAATACATGAATCAGCTCTATCCAGTTAGATTAAATGCTAAAGCAAGTC
AGCTAAAAGGTTTTCTCAGAGTATTATCATATGCTATGACAGTAATTGATAGCATACTTATAAGAGAATTGAAACCTGTT
ATATTATTGATAGTTTTGATGTTAATTGTGACGGAATATTACATCCCTTACAAAATAAAGAAGATGATTGACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

48.547

100

0.485

  pptB Streptococcus salivarius strain HSISS4

47.965

100

0.48


Multiple sequence alignment